Gene Gdia_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1546 
Symbol 
ID6974956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1724147 
End bp1725421 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content66% 
IMG OID643391077 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002275940 
Protein GI209543711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.358116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.715864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG CCTCCTACTG GCATGACACG GCCCCCGTCT TCGACAAGGG CGCGGGCGGG 
CCGGTCGATG GCCACTATGA CGTCGCGGTG ATCGGCGGCG GTTTCACGGG GCTGTCGGCA
GCCCGGCAGC TTGCCAGGGC AGGGGCCCGC GTCGTCGTGC TGGAGGCGGA GCGTGTGGGC
TGGGGCGCGT CCGGCCGCAA TGGCGGGCAC CTGAACAACG GGCTGGCCCA CAGCTACCCC
GATGCGAAGG CGAAGCTGGG CAAGGAGCGC GCGATCGCGC TCTACAAGGC GTTCGACGAT
TCGATCGACA CCATCGCCTC GATCATCGAC GACGAGGGGA TCGACTGCGA TTTCCGGCGC
GCGGGCAAGC TCAAGCTGGC CTCCAAGCCC CAGCACGTCG CGGGACTGGC GAAAAATTTC
GAGGCGATCC ACGCCGAGGT CGATCCCGAC ACCGCCCTGC TGTCCGCAGG CGACCTGAAG
GCCGAGATCG GCGCGCCGTT CTACGGCGCG ATGCTCTTCC GCAAGAGCGC GGTGATGCAT
ATGGGCCGTT ATGTGACGGG CCTGGCCCAG GCGGTCGTGC GGCATGGCGG CACCATTTTC
GAAAACGCGC CGGTGACGGA CACCGTCAGG ACCGGGAACC GGCACGTCCT GACGACGCCG
CGCGGGCAGG TGACGGCGGA CACCGTGCTT GTCGCGACGG GCGCCTATAC GACGCCGAAT
TTCGGGTTCT TCCGCAAGCG GATCATCGTC GTCGGCAGTT TCATCATCGC CACCCGCCCG
CTGAACGCCG CCGAAATCGC GGCGGCCATG CCGGGCAACC GTACCTGCGT GACGTCGATG
CATGTCGGGA ACTATTTCCG CCTGTCGCCC GACAACCGCC TGATCTTCGG CGGTCGCGCC
CGGTTCTCGG CAACGTCCGA CCACACGTCG GATGCCAGGA GCGGCAAGAT CCTGCGCGCG
CAGATGGCCT CCATCTTTCC TGCCCTGGCC GATGTCGAAA TCGATTACTG CTGGGGCGGC
CTGCTGGACA TGACGCAGGA TCGCCTGCCG CGCGCCGGGT ATCAGGATGG CGTGTGGTAT
GCCATGGGGT TTTCGGGACA CGGCGCCCAG CTTTCGACCC AGCTTGGCGT GGTCATGGCC
GACAATATCC TTGGCCGCGA GGACCGCAAC CCGATGAAGG GCGTCGCGTG GAACGCCATT
CCGGGGCATT TCGGCAAGCC GTGGTTTCTG CCGATGGTCG GACTCTACTA CAAGATGCTG
GATCGCATCC GCTGA
 
Protein sequence
MKFASYWHDT APVFDKGAGG PVDGHYDVAV IGGGFTGLSA ARQLARAGAR VVVLEAERVG 
WGASGRNGGH LNNGLAHSYP DAKAKLGKER AIALYKAFDD SIDTIASIID DEGIDCDFRR
AGKLKLASKP QHVAGLAKNF EAIHAEVDPD TALLSAGDLK AEIGAPFYGA MLFRKSAVMH
MGRYVTGLAQ AVVRHGGTIF ENAPVTDTVR TGNRHVLTTP RGQVTADTVL VATGAYTTPN
FGFFRKRIIV VGSFIIATRP LNAAEIAAAM PGNRTCVTSM HVGNYFRLSP DNRLIFGGRA
RFSATSDHTS DARSGKILRA QMASIFPALA DVEIDYCWGG LLDMTQDRLP RAGYQDGVWY
AMGFSGHGAQ LSTQLGVVMA DNILGREDRN PMKGVAWNAI PGHFGKPWFL PMVGLYYKML
DRIR