| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1526 |
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| Symbol | |
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| ID | 6974936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1701560 |
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| End bp | 1703263 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643391057 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002275920 |
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| Protein GI | 209543691 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.30964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACG CGGGATTGGA CGCTGACTCG CCGATCGACG CACTGGCGCG TTTGCTGGTC
GAGCGGGACC GGTGCGACCC GCGCGCCATC GACCGCGCGC GCCGCGCGGC GGACCAGAAT
GGCGGGCGCC TGGACCGGAT TCTGCTGCAA CTGGGGCTGG TGTCGGAACG CGACATGGCC
TTGAGCTACG CGGAATTCCT GGACATGCCC CTGGCGTCCG CTGATCTCTA CCCCCGGGAA
CCCGTCCTGA CGCAGTATCT CGGCGCCCGC TTCCTGCGTG ACATCCATGC GGTGCCGCTG
GGCGTGGACG ACGGGACGGT CACGCTCGCC CTGCGCGATC CGCTGGACGG CTTCGCCGCC
TCGTCGATCG CGGCGGCCAC GGGGCTGCGC GTGTCCTGCC GGGTGGCCGT GCCGATCGAA
CTGGAAGCCG CCCTCGACCG CCTGTACCCG TCCGGGGGCG ATGACGGCGT CCAGCCCGAC
GAGGACACGG CACCGCTGGA AGACGATGCC GAGCGGCTGA AGGACCTGGC GTCCGAGGCC
CCGGTGATCC GCCTGGTCAA CCAGATCGTC AGCCGCGCCG TGGAAACCCA TGCCTCGGAC
ATTCATATCG AACCGTTCGA GGACCGGCTG CGCGTGCGCT ATCGCTATGA CGGCGTGCTG
CACGAGGTCG AAAGTCCCCC CGCGCACCTG ATCCCGGCGA TCATTTCGCG CATCAAGATC
ATGGCCCGGC TGGACATCGC GGAACGGCGC CTGCCGCAGG ACGGCCGGAT CAAGCTGGCC
GTGCGCGGGC ACGACATCGA TTTTCGCGTC TCCACGATCC CCTCGCTGCA TGGCGAGACG
GTGGTGCTGC GCGTGCTGGA CCGTTCCAGC GTGCGGTTCG ACTACGCGAC GCTGGGCCTG
CCGCCGGCCA TCGTCGCACG CCTGCGCGGC CTGCTGGCGC TGCCGAACGG CATCGTGCTG
GTGACCGGGC CGACCGGGTC GGGCAAGACG ACCACGCTCT ATACCGGGCT GGCGGACCTG
AACGCGGTGA CGCGCAAGGT GGTGACGATC GAGGACCCGA TCGAATACCA GCTTGGCGGC
ATCAACCAGG TGCAGGTCCG GCCGCAGATC GGACTGACCT TCGCCGCCCT GCTGCGCGCG
ATCCTGCGCC AGGACCCCGA CGTCATCATG GTCGGTGAAA TCCGCGACAT CGAAACCGCC
CAGATCGCGG TGCAGGCCGC CCTGACCGGC CACCTGGTGC TCTCGACCCT GCATACCAAC
TCCGCCGCCG CCGCCATCAT CCGCCTGCGC GACATGGGGG TGGAGGATTA CCTGCTGACG
GCCGTGCTGC GCGGCGTGGT GGCGCAGCGG CTGGTCCGGC GGCTGTGCGG CCAGTGCCGG
ACGCCCTACA CCCCGCCCCG GGAACTGGTC GATCGCTTCG ACCTGGAAAC GCTCGCAGGC
GGCGGGCCCG TCACGCTGTT CCATCCCGTG GGTTGCGCCG CCTGCCGGAA CACCGGCTAT
AGCGGCCGGC AGGCCATCGC CGAGCTTCTG GAACCGGACG AGGCGGTGGA ACGCCTGATC
TTCGCGCGCA GCGACCACCT GGCGATCGAA CGCGCGGCGG TCGAGGCCGG AATGGTCCCG
ATGTTCACCT CCGGCCTGGT CGCGGCCCTG AAGGGCGAGA CGACGATCGA GGAAGTGACC
CGCAGCGTCC GGGCGGGAAC GTGA
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| Protein sequence | MMDAGLDADS PIDALARLLV ERDRCDPRAI DRARRAADQN GGRLDRILLQ LGLVSERDMA
LSYAEFLDMP LASADLYPRE PVLTQYLGAR FLRDIHAVPL GVDDGTVTLA LRDPLDGFAA
SSIAAATGLR VSCRVAVPIE LEAALDRLYP SGGDDGVQPD EDTAPLEDDA ERLKDLASEA
PVIRLVNQIV SRAVETHASD IHIEPFEDRL RVRYRYDGVL HEVESPPAHL IPAIISRIKI
MARLDIAERR LPQDGRIKLA VRGHDIDFRV STIPSLHGET VVLRVLDRSS VRFDYATLGL
PPAIVARLRG LLALPNGIVL VTGPTGSGKT TTLYTGLADL NAVTRKVVTI EDPIEYQLGG
INQVQVRPQI GLTFAALLRA ILRQDPDVIM VGEIRDIETA QIAVQAALTG HLVLSTLHTN
SAAAAIIRLR DMGVEDYLLT AVLRGVVAQR LVRRLCGQCR TPYTPPRELV DRFDLETLAG
GGPVTLFHPV GCAACRNTGY SGRQAIAELL EPDEAVERLI FARSDHLAIE RAAVEAGMVP
MFTSGLVAAL KGETTIEEVT RSVRAGT
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