| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1525 |
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| Symbol | |
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| ID | 6974935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1700327 |
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| End bp | 1701556 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643391056 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002275919 |
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| Protein GI | 209543690 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.356281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAT TCAGCTTCAC CGCCGTCGAT GCGCAGGGTG CCCTGGTCCG CGGCACGCTG
GAGGGCGAAA CGGCGGAAGC CGTCGTGGCC GCCCTGCGGC GGCGGGGGCA TATTCCCATG
CAGGTCGGCG CCCCCGGCCG GTGGACGCGG ACGGTGGCAT CGGGGCTGGG CGGCCTGGGC
GGCTTGCGCC GCCGCGACCT GCGCCGGGGC GAACTGGCGG CGCTGACGCG GGAACTGGCC
GTCATGCTGG GCGCCGGGCA GGATATCGAC CGGGCGCTGC GCTTCCTGGT CGAAAGCGTG
CCGGGCGCGC GGGCGCGCGC CGTGCTGGGC GGCGTTCGGG ACCGGGTGCG CGACGGCCAG
ACCCTGCACG CGGCGATGGC GCGCTATCCG GGAAGTTTCC CCCGGCTCTA TATCGGCATG
GTCCGCGCGG CCGAGGCCGG CGGCGACCTG GCGCCGACCA TGGACCGGCT GGCGACGCTG
CTGGAACGGG AACGCGCGCT GGCCGCCACC GTGCAGTCGG CCATGATCTA TCCCTGCATC
CTGACGCTCG CGGCCTGCGG GTCCATCGTC CTGCTGCTGA CCGAGGTCCT GCCGCAATTC
ACGCCCCTGT TCGCGCAGAA CGGCGCGGAA CTGCCGGCCT CGACCCGTCT GATGATCCGG
GCCGGCGAAC TGCTGGGCCG CTACGGCCTG CTGATCCCGC TGGTCCTGCT GGCGCTGGCC
GTGCTGGCGC GCGCCGTCCT GCGGTATCCC GGCGCCAGGC TGCGCCTGGA TACGGGGCTG
CTGGCCCTGC CGGTCGCGGG CCGCCTGCTG CGCGAGGTCC TGGCGGCGCG CTTCACCCGC
ATCCTGGGCA CGCTGCTGGA AAACGGGGTG CCGATCCTGG GGGCGCTGTC GATCGTGCGC
GACGCCATCG GCAACCGCGC GGTGGCGCGG GCCGTCGACG CGGCCACCCA GGCCGCCAAG
GGCGGGCGCG GCCTGTCCGC GGCGCTGGAG GCCGCGTCGA TCTTCCCCCG CCGCACCGTG
CACCTGCTGC GCCTGGGCGA GGAAACGGCC CGGCTGGGGC CGATGGCGCT GCGGGCCGCC
GACATCCATG AGGAACAGGT GCGCATCGCC ACCCAGCGCC TGGTCGCGCT TCTGGTGCCG
GCCATCACCA TCATCATGGG GCTGCTGGTG GCCGGGATCG TGTCGTCCCT GCTCCTTGCC
ATGCTGAGCC TGAACGACCT TGCGAAATAG
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| Protein sequence | MAEFSFTAVD AQGALVRGTL EGETAEAVVA ALRRRGHIPM QVGAPGRWTR TVASGLGGLG
GLRRRDLRRG ELAALTRELA VMLGAGQDID RALRFLVESV PGARARAVLG GVRDRVRDGQ
TLHAAMARYP GSFPRLYIGM VRAAEAGGDL APTMDRLATL LERERALAAT VQSAMIYPCI
LTLAACGSIV LLLTEVLPQF TPLFAQNGAE LPASTRLMIR AGELLGRYGL LIPLVLLALA
VLARAVLRYP GARLRLDTGL LALPVAGRLL REVLAARFTR ILGTLLENGV PILGALSIVR
DAIGNRAVAR AVDAATQAAK GGRGLSAALE AASIFPRRTV HLLRLGEETA RLGPMALRAA
DIHEEQVRIA TQRLVALLVP AITIIMGLLV AGIVSSLLLA MLSLNDLAK
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