| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1518 |
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| Symbol | |
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| ID | 6974928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1694348 |
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| End bp | 1696666 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643391049 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_002275912 |
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| Protein GI | 209543683 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.22323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.534897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGTG ACACGACTTC CCGTCGCGGC ATGACCTCCC GCCGTGCGCA GACCGCCTGG
ACCGGCATCG CCTTGTGTTT TTCGATCGCG GGATGCAGCC CCGACAAGCC GCCGCATGTC
TCGCCGCTGG GCGGTCCCCT GCCGCTGGGC GGCACGGCGC CCGACCTGAT GGGTGGCCGG
ATCGAGGGCA CGGACCAGGT CGGGCCGGCG CAATACAGCT ACGGCCGCGG CGCGCTGCCG
CTGATCCGGG GCCAGGGCCG CCCGTACCAG GGCGGGGGCG ACATCGCGCT GAATTTCGCC
GATACCGATG TCCGTGACGC CGTCTCGCAG ATCATGACGG ACATCCTGCA CGTGAATTAC
GCGATCGACC CGGCGGTGCA CGGGCGCGTG ACGCTGCATA CGTCCCAGCC CCTGACCGCC
GGGCAGCTTC TGCCCGCCCT GCAGATCATC CTGGCCCAGG TGCACGCCGT CCTGATCCAG
GCCGACGGGC TGTACCGCAT CGTGCCGGCC CAGGCCGATT CGGCAAATCC CCAGTCCAGC
GCGGCAGGGA TCGCGGAAAA CGCGTCGCTG GGCGGCAGCG TCATGGTGCC GCTGCGCTAC
GCCGATGCCG CAAACCTGGC CAAGGCACTG CAACCGTTCC TGCAGGGCGG CGCCCGCGTC
ACTCCGGTGG ACAGCGCGAA CGCCGTGATC GTCAGCGGCG AGCCGTCCGC GCGCAATACG
CTGGTCGATG TCATCCATGC CTTCGACGTG GACTGGCTCA GCAGCCAGTC CTATGCCCTC
CTGCCGGTGG AATCGGGAAA TGCCAGGGAT ATGGCAACGG CGTTGCAAAG TGCCCTGCAT
GGCGGCAACC TGGTGCAGGT CCTGCCGCTG GCGCGGGTCA ATGCCGTGCT GGTCGTCGCG
CGCAGCGCGC GGCAGATCGA CGATGCACGG CGCCTCTTTG CGCTGATCGA ACGCAATCGG
CGCGCGACCA TGCGGTCGTG GCATGTGTTC TACGTGCAGA ATTCCAGCGT GAACGACGTG
ACCTATACAT TGCAGCAGGC CTTCACGCCG GGCGACGTGA CGGCCACGCC GCCCGAAACC
ACGTCCGGCA CGGCCTCGCA ACTGGGCCAG TCCGGCTTCA CCGGCACCAT GGCCAACGCC
ATGGGCGGCG GCGGGCTGGG CGGCAGCGCG GGCACGGGGA ACACCACGGG CCTGATGGGC
GGCAGCCAGC AGGGCGGGGT CCAGGCCACC GCCGGCCAGG CACCGACCGG CCAGGCGGGC
GGGGGGCCGG CGGCATTCGC CAATCCCCTG CTGGGCGGCC TGGACAACAC TGCCAGCGCC
GAAGGCCGCC CGCAGGCGAT GCGGATCATT TCCAATTCCC AGCATAACGC GATCCTGGTC
TACGGGACGG ACCAGGAAAG CGACACGGTC GAACAGATGC TGCGCCGGAT CGACGTCATG
CCGCTGCAGG TCCGCATCGA TGCCGTCATC GCCGAGGTGC AGCTGAACGA CGCGCTGCAG
TACGGCACGC AGTTCTTCTT CAAATCCGGC GGCATCAACG GCGTGCTCAG CACCAACAGC
CAGACGATCA CCACCGGCAC CCTGGCCACC GCCGCCTTCA GCCATACGCT GCCCGGCTTC
ATCATCGGGG GCGCCAGCGG CGGCGGCGCG CCCTTCGCCA TCGACGCGCT GCAGAACGTC
ACCACCGTCC ACGTCCTGTC CTCGCCGCAA CTGATGGTCC AGGACAACCG GGCGGCCCGG
CTGCAGGTCG GGCAACTGGT GCCGGTCCAG ATCGGCTCGC AATCCAGCAC CATCGGCACG
TCGATCTACA ACCAGTTCAC CTATCAGCCG ACCGGCGTGA TCATGCAGGT GACGCCCCAT
GTCAGCGAGG GCGGGCTGGT CACGCTGGAC GTGTCGCAGG AGGTCAGTTC CGTCAGCCCG
ACCGCCGCCA GCACGGCCAA CGCGGCGTCC AATCCCACCT TCAACGACCG TTCGGTCAGT
TCCCGCGTCG TGGTCCAGGA CGGGCAGACG GTGGGGCTGG CCGGCCTGAT CACCGACAGT
TCCAGCCGCA TCAACAGCGG CATCCCGTGG CTGAAGAACA TCCCGGTCCT GGGCGTCCTG
GCAGGGAACC AGAACAACAA CCGCCAGCGG ACGGAATTGC TGATCCTGAT GACGCCGCAC
GTCATCCATG ACCAGCGCGA CGCGGTCGAC CTGATGGAGG ATCTGCGCGA CACCCATCCC
AACGCGGCGA ACGTCCCCGA CGAATTGCGG GTCATGCGCA TGACCGGCAG CGCCGACCCC
CAGCAGCGCC TGCGCGAAAA GGTCGGGCTG GGACCGTGA
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| Protein sequence | MNSDTTSRRG MTSRRAQTAW TGIALCFSIA GCSPDKPPHV SPLGGPLPLG GTAPDLMGGR
IEGTDQVGPA QYSYGRGALP LIRGQGRPYQ GGGDIALNFA DTDVRDAVSQ IMTDILHVNY
AIDPAVHGRV TLHTSQPLTA GQLLPALQII LAQVHAVLIQ ADGLYRIVPA QADSANPQSS
AAGIAENASL GGSVMVPLRY ADAANLAKAL QPFLQGGARV TPVDSANAVI VSGEPSARNT
LVDVIHAFDV DWLSSQSYAL LPVESGNARD MATALQSALH GGNLVQVLPL ARVNAVLVVA
RSARQIDDAR RLFALIERNR RATMRSWHVF YVQNSSVNDV TYTLQQAFTP GDVTATPPET
TSGTASQLGQ SGFTGTMANA MGGGGLGGSA GTGNTTGLMG GSQQGGVQAT AGQAPTGQAG
GGPAAFANPL LGGLDNTASA EGRPQAMRII SNSQHNAILV YGTDQESDTV EQMLRRIDVM
PLQVRIDAVI AEVQLNDALQ YGTQFFFKSG GINGVLSTNS QTITTGTLAT AAFSHTLPGF
IIGGASGGGA PFAIDALQNV TTVHVLSSPQ LMVQDNRAAR LQVGQLVPVQ IGSQSSTIGT
SIYNQFTYQP TGVIMQVTPH VSEGGLVTLD VSQEVSSVSP TAASTANAAS NPTFNDRSVS
SRVVVQDGQT VGLAGLITDS SSRINSGIPW LKNIPVLGVL AGNQNNNRQR TELLILMTPH
VIHDQRDAVD LMEDLRDTHP NAANVPDELR VMRMTGSADP QQRLREKVGL GP
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