| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1440 |
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| Symbol | |
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| ID | 6974849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1605608 |
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| End bp | 1607920 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643390971 |
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| Product | ABC transporter related |
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| Protein accession | YP_002275835 |
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| Protein GI | 209543606 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.338764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.147226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTTAG CCGATGATGT GCTTGCTGCT GCCGACCAGG ACCAGGACCA TGATTTGGGT
GGGGTAACCG GCGACAATAA CAAAGGTACA TATGCAAGCC AGAGAGAACA GGAAACGCCT
GCCCTAATCA GGCTGCGAGC GGTAATCGCC GCCGGCCGTT TCCACGGACT ACAACTCGAT
GTGCTTGATT TCATGGCGGA GCCGGGTGAA CAATCGCCCT CGTCCGCCAC GTTGGTCCGA
TGGCTGAATG AACAGGGGGC AGTGGCCAAA GGAATGCGGG TCGAATGGCG TCATCTCGTC
CGGATGCGTA ACTCCCCGCC GATTGTACTG ATGTTCCGGG ATGGCTCCGC CGCGCTGATG
GTGAATGCGG AGACCGAGCG CGGCGTTATC TGGCTGCGCG ACCCGATGGC GCATGAAGCG
GAGCCGCCAG TTCCCATAGA CGAAATGCGG CTGTCGGAGA TCTGGAATGG CGATATCATC
CTGATCAAAC GCCGGCAGGA TCAGAGCGAG ATGGATGCGC CGATCAACAT GGCCTGGCTG
GCCAGGATGG TGCTACGCGA GAAGAAATCG CTGCGCGATA TTACCTTCTC CTCCCTGACC
TTGAGCGTCC TGCAGATTTT CCCGCCACTG GCGGTCATGC AGGTCATCGA CCGCGTGGTG
AACAACCACT CGATGACGAC ACTTGTCTCC ATCGCGGCCA TCGTTCTGAT GCTTTCGTTT
TACGAGATCC TGCTGTCCTT CGGGCGACGC GAACTGACGC TCATTCTGAC GACACGGATC
GATGCCAGAA TATCGCTCCA TCTATTCAAT CGCCTCCTGG CGTTACCTCT CGAATATTTT
GAACAGCAGC AGGCCGGCAA CATTATCGGC CGGGTGATGG CGATCTACAA GGTCCGGGAC
TTCATGACCG GACGGCTTAT GTCGACGTTC CTCGATATGT TTACGCTAGT GGTCATTCTG
CCCTTCCTCT TCTATCTCAG TTCGACCCTG GCATGGATGA CAGTGGCGAC CGCCGGGATG
ATCGGCCTGG TCATCGCCGT GTTCATGCGG CCCGTCGGTC GTATCTATGG CAGGCTCGTC
AAGGCTGAGG CAGAACGATC CTCGGTCATT TACGAAACCG TAGCCGGAAT CCGGACGGTC
AAGACCCTGG CGCTCGAACC AGCCCGCAAG CAGGAATGGG ATCGTCGCAC CGCCGACGTC
GTCCGATGGA AGCTCTCCGT CGGACGCATC GCGAACTGGC CGACCACAGT GACCATGCCG
CTGGAGATGT TCATCAATCG TGGCATCATC CTTGTGGGAG CCTATCTTGC GCTGACCAAT
GCCAGCACTG TCGGCGTCGG TGCGTTGGTC GCCTTCATGA TGCTCGGGGG ACGCGTCGCG
GCGCCGTTGG TGGGCGTGGC GCGGCTGCTC GACGATCTGA ACGAAGTGAC GACCTCGCTT
GCCGAAGCGG GTTCCGTGCT CAACCAGTCC ACCGAGACGA AGGCGCTCAC CGAAGGCATG
CGCCCACCCA TCAAGGGGGC GCTGTCGTTC ACCGACGTGA ACTTTACCTA TCCCGGCTCC
ACGACAAAGG CTCTGAACGA CGTCAGTTTC GCGCTTCCAG CCGGGACGAT GCTCGGTCTG
GTCGGTCGTT CCGGTTCCGG GAAGTCGACC ATTACCCGCC TGCTGCAAGG CGTCAGCCGC
TCCTACGAAG GCTATCTGAA GCTGGACGGG GTCGATCTGC GCGAAATCAA CCTGACCCAT
CTTCGCCGCT CCCTTGGCGT GGTGCTTCAG GATAATTTCC TGTTTCGAGG TACGATACGC
GACAATATCG CTGCCGGCCG GCCGGGGCTG ACCATTGACG ACGTCGTGCG GGCGGCACGG
CTCGCGGGCG CCGAGGAGTT CATCGAGCGC CTTCCCGCCG GCTACGAGAC CTGGATCGAG
GAAGGATCGA CCAACATCTC AGGCGGCCAA CGTCAACGCC TCGCGATCGC CCGCGCTCTG
ATTTCGGATC CGAAATTGAT GATCCTCGAC GAGGCGACTT CCGCGCTCGA TCCCGAGAGC
GAAGCCCTCG TCAGCGCCAA TATCGAGCGC ATGGGCAAGG GACGCACGAT GATCATCGTC
TCTCACCGTC TTTCATCGCT GGTGAATTGC GACCAGATTC TGGTCATGGA ACACGGGCGG
GTCGCGGATA TCGGATCACA CGAAGCATTG CTGGAGCGCT GTACGATCTA TCGTACGCTT
TGGATGCAGC AGAATAGGCA CACGGAACGT CGCGCCGGCG CTCGCCGCGC GAGCGAGACC
GAATTCGCGC CAGTGGTTGC TGAGGGAGGC TGA
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| Protein sequence | MDLADDVLAA ADQDQDHDLG GVTGDNNKGT YASQREQETP ALIRLRAVIA AGRFHGLQLD
VLDFMAEPGE QSPSSATLVR WLNEQGAVAK GMRVEWRHLV RMRNSPPIVL MFRDGSAALM
VNAETERGVI WLRDPMAHEA EPPVPIDEMR LSEIWNGDII LIKRRQDQSE MDAPINMAWL
ARMVLREKKS LRDITFSSLT LSVLQIFPPL AVMQVIDRVV NNHSMTTLVS IAAIVLMLSF
YEILLSFGRR ELTLILTTRI DARISLHLFN RLLALPLEYF EQQQAGNIIG RVMAIYKVRD
FMTGRLMSTF LDMFTLVVIL PFLFYLSSTL AWMTVATAGM IGLVIAVFMR PVGRIYGRLV
KAEAERSSVI YETVAGIRTV KTLALEPARK QEWDRRTADV VRWKLSVGRI ANWPTTVTMP
LEMFINRGII LVGAYLALTN ASTVGVGALV AFMMLGGRVA APLVGVARLL DDLNEVTTSL
AEAGSVLNQS TETKALTEGM RPPIKGALSF TDVNFTYPGS TTKALNDVSF ALPAGTMLGL
VGRSGSGKST ITRLLQGVSR SYEGYLKLDG VDLREINLTH LRRSLGVVLQ DNFLFRGTIR
DNIAAGRPGL TIDDVVRAAR LAGAEEFIER LPAGYETWIE EGSTNISGGQ RQRLAIARAL
ISDPKLMILD EATSALDPES EALVSANIER MGKGRTMIIV SHRLSSLVNC DQILVMEHGR
VADIGSHEAL LERCTIYRTL WMQQNRHTER RAGARRASET EFAPVVAEGG
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