| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1397 |
|---|
| Symbol | |
|---|
| ID | 6974805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 1560183 |
|---|
| End bp | 1560818 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643390927 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_002275792 |
|---|
| Protein GI | 209543563 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1279] Lysine efflux permease |
|---|
| TIGRFAM ID | [TIGR00948] L-lysine exporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTCG CTTCCAGCTT TGCCAGCGGC TTCGGCCTGG CCGCCGCCCT GATCGTCGCC
GTCGGTGCCC AGAATATCTT CGTCCTGCGC CAGGGGCTGC GCCAACGGCA CGTCGCGCCC
GTGGTGGCGT TCTGCGCCCT GTCCGACCTG CTGCTGGTCT CGGCCGGGGT GGCGGGCATC
GGCATGCTGC TGCACACGCT GCCGGGGCTG GTCCGGCAAC TGACCTGGGG GATGTCCCTG
GGCGGCGCGG TGTTCCTGTC CTGGTACGGG ATCAGCGCGG CGCGTCGCGC GCTGGCACCC
GGCGCGCTGG TGACCGGCGG CGCGGAAGGG CCGGATACGC TGGCCGGGAC GATGGGCCGG
GCGGCGGCGT TCACCTACCT CAACCCGCAT GTCTATCTGG ATACGGTGCT GCTGATGGGG
GCGGTCGGCG GGGCCCTGCC CGGCGGGGCG CGGCCGCTGT TCGTCGCCGG GGCCGCCACG
GCCAGCGCGC TGTGGTTCGT GGTGCTGGGC TACGGCGCGC GGCTGCTGGG GCCGGTCTTC
GCCCGTCCCG CCGCCTGGCG GGTGCTGGAC AGCATGGTGG CGGCGGTGAT GATGGTCATG
GCCGTCGTGC TCGCCGCCCG CAGCGTCGGT CCGTAA
|
|---|
| Protein sequence | MFFASSFASG FGLAAALIVA VGAQNIFVLR QGLRQRHVAP VVAFCALSDL LLVSAGVAGI
GMLLHTLPGL VRQLTWGMSL GGAVFLSWYG ISAARRALAP GALVTGGAEG PDTLAGTMGR
AAAFTYLNPH VYLDTVLLMG AVGGALPGGA RPLFVAGAAT ASALWFVVLG YGARLLGPVF
ARPAAWRVLD SMVAAVMMVM AVVLAARSVG P
|
|---|
| |