| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1296 |
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| Symbol | |
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| ID | 6974701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1445772 |
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| End bp | 1448816 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643390825 |
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| Product | double-strand break repair protein AddB |
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| Protein accession | YP_002275693 |
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| Protein GI | 209543464 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.862539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG TCGTCACCAT CCCGCCGCAT GTGCCTTTCC TGGACGCGGT CGCGACCCGG
TGGATGGCCG AAATCGCGGA CGATCCGCAG CGCAGCGGCG ACGGGCTGAT CCTGCTGCCC
AGCCGCCGCG CCGCCCGCGC CCTGACCGAG GCCTTCCTGC GCCATGCCGA TGGCCGGCCC
ATGCTGCTGC CGCGCATCGC CCCCATCGGC AGCCTGGACG AATCCGCCCT GGCCCTGTCG
GGGCAGGAGG CGCTGGACCT GCCGCCCGCC GTCGAGCCGC TGCGCCGGCT GGCGACGCTG
ACGCGCCTGA TCCTGCAGGC CGGCGATGCC TTCGGCGATG TCCGCACCAT CGACCAGGCT
TGGCCGCTGG CCCAGGCCCT GGCGGAGTTG ATGGACGATG CCGAATGGGC GGAATGCGAT
CTGGCGGAGC GCCTGCCGGC GGCGGCCGAG GGCGATTTCG CCGAACATTG GCACCTGACC
CTGCGTTTCC TGTCGATCGT GACCGGGATC TGGCCCGCCT GGCTGGCCGA AGAGGGGGTC
ATGAATCCCG CCGCCCGGCA GGTCGCCCTG CTGCACGCCC AGGCCCGGCG GTGGCACGCC
TCCCCCCTGC CGGGCGGCGA GCGGCTGTGG GCCGTGGGCT TCACCGACGC CATGCCGTCG
GTCCTCGCCG TGCTGGACGC GGTGCTGGCC ATGCCGGGCG GGCGGCTGGT GCTGCCCGGG
GTCGATCTCT CGCTGGACGA GGCCTCATGG ACGGCCCTGC CGGACGGCCA CCCGCAGGCC
GGCATCGCCC GGCTGCTGGC GGGCGTGGGC CGGAACCGCG CCGATCTGGC GCAATGGGGC
GATCCGCCCC ATGACGCGGG TTCCGGTGAC GCGGGTATGG CATGCCCGGT GGACCGGGGC
GCGGTGCTGG CCCGTGCCCT GCTGCCGGCG GCCGCATTGG GCGAATGGCT GCGGGACACC
ACGCCGGTCG CGATGGACGG ATTGTCGGTC CTGCGCGCCG CCGACCAGCA GGAGGAAGCG
GCGGCCATCG CGCTGCTGCT GCGCCAGGCG ATCGCGGAAC CGGGGCATCG CGCCGCCCTG
GTGACGCCCG ACCGGGGCCT GGCCGGCCGG GTCGCGGTGG AACTGGCACG CTGGGGCGTG
GTGGCGGACG ACAGCGCCGG CGAGCCGCTG GGGGCCACCC CGCCCGCGAT CTTCCTGCGC
CTGGTGGTGC AGGCCGCGAC CGGCGGATTG TCGCCCGTCG CCCTGCTGTC GCTGCTGAAA
CATCCGCTGG CGGCCTGCGG CCTGTCGCCC GGGGCCTGCC GTGCCTCGGC CCGCCTGCTG
GAACGCGCGC TGCTGCGCGG ACCGGCGCCC CGGCCCGGAA TCGACGGGCT GCGCGATCGC
CTGGCCGTGG CGCGCGACGA CGCGCATGGC GCACTGGCCG ACCGGCCCGA CGCGCCCGAG
GACCTGGCCG GGTTCGTCGA CCGGGTGGAA CGATGCCTGG CGCCGCTGCT GACCCTGGTC
GCGGCGCCGG CCCCGGGGCC GGTCGCCGAC CTGCTGGCCG GCCTGGTCGA AGCCGCCGAG
GCACTGGCCA CCACCGACGA CCGGGCCGGG GCGGACCGCC TGTGGGCGGG CGAGGACGGC
AACGTGCTGG GCCAGCACCT GGCCGCGCTG ATCGCGTTCT GCGACGTGCT GCCGGCGCAG
GGGGCGACGA TCCTGGATGG CCTGCTGGCG GCCTCGATGG CTGGCCAGAC CGTGCGTTCG
CGGCGCGGCC TGCGCGGACG GGACGCCACG GCGCTGCATC CGCGCATCTT CATCTGGGGC
CTGATGGAAG CCCGGCTGCA GGCTGTCGAG ACGATGGTGC TGGGTGCGCT GGTCGAAACC
GTATGGCCCC CCGCGACCGA TCCCGGCCCG TGGATGAGCC GTCCGATGCG TGCCCGCGTG
GGTCTGCCCT CGCCGGAACG CGCGATCGGG CAGGCGGCGC ATGATTTCGT CGCCTGCGCC
TGCGCCGCCC CGCGGGTCGT GCTGTCGGTC CCCGGCCGGC GCGACGGCGC GCCCACCGTG
CCCGCGCGCT GGCTGGTGCG GCTGGATGCC TTGCTGGCGG GACGGGACCA GGCGCTGGCC
GCGCACCCGG CCCTGTCCTG GCTGTCGCGG CTGGACCGGC CGGTGGATGC GCCCCGCCCG
GTCGCCCCGC CACGGCCCCG CCCGCCCCTG GCCGCCCGGC CGCGCGCCCT GACCATCACC
GAGATCGAAA CCTGGATGCG CGACCCCTAT GCCATCCATG CGCGCCATAT CCTGGGCCTG
CGCCGGCTGA AGGAGATCGA GGAACCGGCG GACGCCGCCG ACTACGGCAC GATCGTCCAT
GCGGCGCTGG ACCGCTGGTT CCGCCAGCCG GCCGAGAGGC GATCGGCGGC GGGCGAGGCC
GGGTTGCGCG CGACCTTCGC CGAGGAACTG GCGGCCGCCC GCCTGCGTCC GGCGCTGGCC
GCCTGGTGGG CGCCGCGCCT GGCGCGGATC GCGGCCTGGG TGGTCCAGGC CGAGGCCGCC
CGTGCCTCGG GCCAGGCCGG TGCCGTCGTG ACCCGGACCG AACGGTCGGG AACGGTGGAA
CTGTCCGGCC TGCCCGGCGG CCCGTTCGTC CTGCGCGGCC GCGCGGACCG GATCGACCGC
AACGGGGACG GGGGCCTGAC CCTGATCGAC TACAAGACCG GCACCCTGCC GCGCCGCAAG
AGCGTCTTCG CCGGCTGGTC CTCGCAACTG GTGCTGGAGG CCGCGATGGC CGAACGCGGC
GCCTTCGGGG CCGAACTGGT CGGGCGGGCG CGGGAACTGC TCTACTGGCG GCTGACAGGC
GGCCCGGAAG CCGGCGAGGA CCTGCCGGTG GCGACCGGCC AGGAACTGGA CGACCTGATC
GCCGCGTCCT GGGACAATCT GCGCGGGCTG ATCGCGATGT ATGACGATCC CGCCCAGCCC
TACCTGTCCC ATCCGCGCCC GGAGGAAGGG CCGCGCTTCG CCGATTACGC CCGCCTGGCC
CGGGTCGCGG AATGGAGTGC CGCGCGCGAC GAGGCCGGAT CATGA
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| Protein sequence | MSDVVTIPPH VPFLDAVATR WMAEIADDPQ RSGDGLILLP SRRAARALTE AFLRHADGRP
MLLPRIAPIG SLDESALALS GQEALDLPPA VEPLRRLATL TRLILQAGDA FGDVRTIDQA
WPLAQALAEL MDDAEWAECD LAERLPAAAE GDFAEHWHLT LRFLSIVTGI WPAWLAEEGV
MNPAARQVAL LHAQARRWHA SPLPGGERLW AVGFTDAMPS VLAVLDAVLA MPGGRLVLPG
VDLSLDEASW TALPDGHPQA GIARLLAGVG RNRADLAQWG DPPHDAGSGD AGMACPVDRG
AVLARALLPA AALGEWLRDT TPVAMDGLSV LRAADQQEEA AAIALLLRQA IAEPGHRAAL
VTPDRGLAGR VAVELARWGV VADDSAGEPL GATPPAIFLR LVVQAATGGL SPVALLSLLK
HPLAACGLSP GACRASARLL ERALLRGPAP RPGIDGLRDR LAVARDDAHG ALADRPDAPE
DLAGFVDRVE RCLAPLLTLV AAPAPGPVAD LLAGLVEAAE ALATTDDRAG ADRLWAGEDG
NVLGQHLAAL IAFCDVLPAQ GATILDGLLA ASMAGQTVRS RRGLRGRDAT ALHPRIFIWG
LMEARLQAVE TMVLGALVET VWPPATDPGP WMSRPMRARV GLPSPERAIG QAAHDFVACA
CAAPRVVLSV PGRRDGAPTV PARWLVRLDA LLAGRDQALA AHPALSWLSR LDRPVDAPRP
VAPPRPRPPL AARPRALTIT EIETWMRDPY AIHARHILGL RRLKEIEEPA DAADYGTIVH
AALDRWFRQP AERRSAAGEA GLRATFAEEL AAARLRPALA AWWAPRLARI AAWVVQAEAA
RASGQAGAVV TRTERSGTVE LSGLPGGPFV LRGRADRIDR NGDGGLTLID YKTGTLPRRK
SVFAGWSSQL VLEAAMAERG AFGAELVGRA RELLYWRLTG GPEAGEDLPV ATGQELDDLI
AASWDNLRGL IAMYDDPAQP YLSHPRPEEG PRFADYARLA RVAEWSAARD EAGS
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