| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1224 |
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| Symbol | |
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| ID | 6974628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1362782 |
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| End bp | 1365298 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643390753 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002275622 |
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| Protein GI | 209543393 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTTT TTTCCGTCCG TCGCGATCCG CGGCGGGGCC TATCCTATGT GGCGATTCTG
GTCCTGGCGC TGCTGGCCGG GGCAACGCCC GCGATCCGGC CGGCCCAGGC GGCCGACGCC
GCGCCGGCCA CCCAATACTC CGCCCAGGCC CCCATGACCG CCGATCAGGC GCAGCAGGTC
CTGGGGGTAC TGAACGATCC GCACAAGCGC GAGGAGTTCA CCCGCACCCT GACGGCCATC
GCCAGGGGCC TGCCCCAGGC AGCCCCGGTT CCGGCCCGGG CTTCGGCGCC AGCCGCCGCC
CCCGCGCCGG CCGCGGGCAA TGCGGACGTG GCGCTGGAGC CCAACAGCCT GGGCAGCGAC
GTCATGTCCG AACTGGCGGG CGTGCGCGAC GTGACGCTGC ACCAGGCGCG TGAATTCATC
GGCCTGTTTT CCGACCTGGT CTTCGTCGGG CACTGGATCC ATTCCGAACT GTCCAGCCCG
CAATCGCGCC AGACCCTGTT CGACGCGTTC GGACGCGCCG GGCTGATCTT CATCCTGGCG
CTGGCGGCCG AGCGGGGCCT GGCCATCGCG CTGCGCCGGC CGCTGAGCGC CGTGACCGCC
CGCGCCGTCG AAGCCGAGCG GCAACTGAAT CGCAGCGCGG AGCAGGAAAC GGCGGAAGCC
GCCATGCCGG CCCCGGAGAC GGAGGCCGAG CAGGCGGTCC AGGACACCCG CCGGCAGGAC
GTCCGCAAGC AGGTCGAAAC GCTGCGCATC ATCCGCCGCA TTCCGTATTC GCTGCTGCAT
CTGCTGACCA AGCTGCTGCC CGTGGCCCTG TTCCTGGGGA TCGGCTACGC CGGGGCGGCG
TTCGTCGGCG ACGGCGAGGT CACGGAACTG GTCACGCTGA CCCTGACCAA CGCCTATGTC
GCGGCGCGGG CGATGTATCT GGTGGTCGAG ATGATCATGG TGCCGAAATC GCCGACCATC
CGGCTGTGTG GGGCATCGGA CCGGACGGCG CGGATCGTGA CGCGCTGGTG GAACGTGCTG
GTGGCCGTGC CGTCCATCGT CGTCTGCCTG TCGTCGCTGG GCGCGCTGTT CCACCTGGCC
CCGCGCGGGA CCGAGGCCCT GATCCGTGCC ATCGTGCTGG CCGAGCACGT GATGATCGCG
GTGTTCATCT GGCGCATCCG CAAGCCCGTC GCCATGGCCA TGCAGCCGCC GGCCCGCTTC
CGGGGCCGCT CGTTCTGGAG CTTCGTCGGC CATCTGGCGC ATTTCTGGTG GCTGCCGGCG
ATGGTGTTCG ACCTGGCGCT GTGGCTGGTC TGGGCGATGC ATGTGCGCGG CGGATACACG
TGGATCTGGC GCACCACGAT CCTGACCATC GTCGTCATCC TGCTGTCGCG CGTGCTGTCG
CTCCTGGCGT TCGGCCTGCA GAACAGGGTC TTTCATGTCA GCGACGAGTT CGAGGCCCGC
TATCCCGGGC TGCAGGCGCG GGCGGACTAT TATTATCCCT ATGCGCGGCG CGGGCTGTCG
ATCCTGCTGG TCTTCGCCAC CCTGGTCATC CTGCTGCAGG CATGGGGCAT CCCGGCGGTC
GCCTTCTTCC TGTACGGCGC GCTGGGCACG CAGATCATGA CGGCGCTGGT GTCGATCATC
ATCGCCTTCA CCATCGCGAT CGCGGTGTGG GAAATCGCGA ATGCCGCGTT GCAGAACCAG
ATCGCCCGCT ACGAGACCAC CGAGCAGGCA TCCCGCGCCA TCCGGCTGCG CACGGTGCTG
CCGATCATCC GCACCGTGCT GCTCAGCGTC ATCATCATCA TCGTCGCGGT CACGACCCTG
TCGCAGATCG GCCTGAACGT GGCGCCGCTG CTGACCGGCG CGGGTATCAT GGGCGCCGCC
ATCGCCTTCG GGTCGCAAAG CCTGGTGAAG GATTTCATCA CCGGATTCTT CATGCTGGTG
GAAAACGCCA TGCAGGTCGG CGACTGGGTC ACGGCGGGCG GCATTTCGGG CACGGTCGAG
CATCTGTCGA TCCGCACGCT GCGCCTGCGC ACCACGTCGG GCGACGTGCA TATCATTCCG
TTCTCGTCCG TGACCTCGAT CGCCAACACG TCGCGCGACT ATAACGTCGT CGTCGTGACC
TTCATGCTGG ATCTGAGCGA GGACCCCGAC CGGGTCGCCG CCATCCTGGC CGACGTGGTG
GCCGGCATGC GGGCGGACCC GCAGTTCGCA CCCATGATCC TGACCGATTT CGCCTTCCTG
GGCGTGGAGA AGGCGGACGG CGACGGGGCG AAGCTGGTGG GATCGTTCCG CACCACGGCG
GGCAACAAAT GGAAGGTGTC GCGCGAATAT TATCGGCGCC TGGGGCTGCG CATGGTCGCG
GAAGGGGTGA AATTCCCCAG CCCCACCGCC ATTTCCCTGC TGGGCAACAC CGGCGGAGCG
CCGTTGCGCA TCCAGATGGT GACGCCCCCG GCGGCGGCGA ACAGCAATAC CCAGCCCCCG
ACCGACGCTC CGCCGCGCGT CCCGGGGGGC GTTCCTCATC CGGACACATC GCAATGA
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| Protein sequence | MPVFSVRRDP RRGLSYVAIL VLALLAGATP AIRPAQAADA APATQYSAQA PMTADQAQQV
LGVLNDPHKR EEFTRTLTAI ARGLPQAAPV PARASAPAAA PAPAAGNADV ALEPNSLGSD
VMSELAGVRD VTLHQAREFI GLFSDLVFVG HWIHSELSSP QSRQTLFDAF GRAGLIFILA
LAAERGLAIA LRRPLSAVTA RAVEAERQLN RSAEQETAEA AMPAPETEAE QAVQDTRRQD
VRKQVETLRI IRRIPYSLLH LLTKLLPVAL FLGIGYAGAA FVGDGEVTEL VTLTLTNAYV
AARAMYLVVE MIMVPKSPTI RLCGASDRTA RIVTRWWNVL VAVPSIVVCL SSLGALFHLA
PRGTEALIRA IVLAEHVMIA VFIWRIRKPV AMAMQPPARF RGRSFWSFVG HLAHFWWLPA
MVFDLALWLV WAMHVRGGYT WIWRTTILTI VVILLSRVLS LLAFGLQNRV FHVSDEFEAR
YPGLQARADY YYPYARRGLS ILLVFATLVI LLQAWGIPAV AFFLYGALGT QIMTALVSII
IAFTIAIAVW EIANAALQNQ IARYETTEQA SRAIRLRTVL PIIRTVLLSV IIIIVAVTTL
SQIGLNVAPL LTGAGIMGAA IAFGSQSLVK DFITGFFMLV ENAMQVGDWV TAGGISGTVE
HLSIRTLRLR TTSGDVHIIP FSSVTSIANT SRDYNVVVVT FMLDLSEDPD RVAAILADVV
AGMRADPQFA PMILTDFAFL GVEKADGDGA KLVGSFRTTA GNKWKVSREY YRRLGLRMVA
EGVKFPSPTA ISLLGNTGGA PLRIQMVTPP AAANSNTQPP TDAPPRVPGG VPHPDTSQ
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