| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1211 |
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| Symbol | tolB |
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| ID | 6974615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1349614 |
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| End bp | 1351002 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643390740 |
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| Product | translocation protein TolB |
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| Protein accession | YP_002275609 |
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| Protein GI | 209543380 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.896355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCCT GTGACCTTCC GCCGACTTCC CCCTGGATTT CCGATACCGA TGCATCGCTG
CTGGCGACCC ATCTCGGCCG CCGCATGCTG CTGGGAACGG GCGGCGGCAT CGCGGCCGGC
ATCCTGGCCG CGCCGCTGTC GGCCGTCGCG CAGGGCGCGC CCGCGGCGGG CCCGGGTGCC
GCCGAAATCA CGGTGGACCA GGCCCGCACG GCGCCGATTC CCATCGTCAT TCCGGCGCTG
GGCGGCGACG CGGGCGCGCT GGTCAGCAGC GTGATCTCGG GCGACCTGGG GAATTGCGGC
CTGTTCGCCC CGATCAGCGG GTCGCTGCCC GTGGGGGTGC CGGATTTCGG AACGTACAAG
TCGCTGGGCG CCCGCGCGCT GGTCAGCGGT TCCGCGACGA CCGGCGGCGG CGGCCTGCGC
GTGGAATTCC GCCTGTGGGA CGTGCTGACC GGCCAGCAGA TCCAGGGCAC GGCCTATACG
GCGGGCGCCG GCGACGCGCG CAAGATCGCG CACATCATCG CCGACGTGAT CTATGAACGG
CTGCTGGGCG AAAAGGGCTA TTTCAACACC CGCATCGCCT ATATCGCCCG GTCCGGTCCG
CGCGCGCACC AGACGACGCG GCTGGCGATC ATGGACCAGG ACGGCGCCAA CAGCCATTAC
CTGTCGGGGG GGCAGTGGCT GACCCTGACC CCGCGCTTCA GCCCGACCAG CGACCAACTG
GCGTTCATGT CCTATGCCAA CAACCGCCCG CGCGTTTACA TGCTCAACCT GGCGACGGGC
CGGCAGCAGT TGCTGGGCGA TTTCGAAGGG ATCTCGTTCG CGCCGCGTTT CGCGCCGGAC
GGGCGGGCGG TCATCCTGTC GGCCACGCGC GGCGCGGGGT CGGACATCTA TAGCGTGGAC
CTGGTCACAC GGGCCAAGCG GCAGATCACC AGTTCCGGCG CCATCGATAC CAGCCCGTGC
TACAGCCCGG ACGGCTCGCA GATCGTCTTC AACTCGGACC GGGGCGGTTC GCCGCAGCTT
TATATCATGA GCGCGGGCGG CGGCGACGCG CGGCGTATTT CGTACGGCAA CGGCGTGTAC
GGCTCGCCGG TCTGGTCACC GCGCGGGGAT TTGATCGCCT TCACCCGGAT CGCCAACGGC
AGCTTCTCGC TGGGCGTGAT GGCCCCCGAC GGCACGGGCG AGCGGATCAT GACCCAGGGC
TTCACCGTCG AAAGCCCCAC CTTCTGCCCG AACGGACGGG TGATCGCCTT CTGCCGCCAG
ACGGCGGCGG GGGCCGGCGG GGCAGGGTTT TCCTCGGGCA TCAGCACCGT CGATATCACC
GGCTTCCACG AACGCGCGAT TCCGGCCGGC GGCGCGTCCG ACCCGGCCTG GTCGCCGCTG
AACGGTTAA
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| Protein sequence | MRPCDLPPTS PWISDTDASL LATHLGRRML LGTGGGIAAG ILAAPLSAVA QGAPAAGPGA
AEITVDQART APIPIVIPAL GGDAGALVSS VISGDLGNCG LFAPISGSLP VGVPDFGTYK
SLGARALVSG SATTGGGGLR VEFRLWDVLT GQQIQGTAYT AGAGDARKIA HIIADVIYER
LLGEKGYFNT RIAYIARSGP RAHQTTRLAI MDQDGANSHY LSGGQWLTLT PRFSPTSDQL
AFMSYANNRP RVYMLNLATG RQQLLGDFEG ISFAPRFAPD GRAVILSATR GAGSDIYSVD
LVTRAKRQIT SSGAIDTSPC YSPDGSQIVF NSDRGGSPQL YIMSAGGGDA RRISYGNGVY
GSPVWSPRGD LIAFTRIANG SFSLGVMAPD GTGERIMTQG FTVESPTFCP NGRVIAFCRQ
TAAGAGGAGF SSGISTVDIT GFHERAIPAG GASDPAWSPL NG
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