Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1164 |
Symbol | |
ID | 6974568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 1302313 |
End bp | 1304097 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643390693 |
Product | Gluconate 2-dehydrogenase (acceptor) |
Protein accession | YP_002275562 |
Protein GI | 209543333 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAATA TCACGATGAA ATCCGTCGAT GCGGTGGTGG TCGGCGGTGG TTGGGCCGGG TCGATCATGG CCAAGGAACT GACCGAGGCC GGACTGAATG TCGTCATGCT GGAACGCGGC GCCGACCGCA GCACGGCCAG CGACGGCGCC TATCCCGGTT CGATCGACGA ACTGCAGGGC AATTTCCGTC ACAAGATCTT CCAGGATCTC TCCCGCAGCT CGGTGACGAT CCGCAACAAT TCCAGCCAGA CCGCACTGCC TTATCGTCAG ATGGCCGCGT TCCTGCCGGG CGAGGGGGTC GGGGGCGCCG GCCTGCACTG GTCGGGCGTG CATTTCCGCA TGCCGCCGGA CGACCTGATC CTGCGCAGCA AGGTCAAGGA AAAATACGGC GAGAAATTCA TCCCCGAAGG CATGAACCTT CAGGATTACG GCGTCACCTA TGACGAACTG GAACCGTTCT TCGACAAGGC CGAGAAAGTC TTCGGCACGT CGGGCGAGGC CTATACCGTC AACGGGCAGG TCGTCGGCAA GGGGAATGTC TTCGCGCCGT CGCGTTCCGA CCATTTCCCG CTGCCGGCGC TGAAGGACGT GTATGGCGCC AGCCTGTTCC GCCGCGCGGC AGCGGAAGTC GGGTTCCATC CTTATGCGAT GCCGGCGGCG AATGCCTCGG CGCAATATAC CAATTCGTAC GGCGTGCAGA TGGGGCCGTG CAATTTCTGC GGATATTGCA GCGGCTATGC CTGCTACATG TATTCGAAGG CCTCGCCGAA CGTGAATATC CTGCCGGTGC TGCGCACCGA TCCGAAATTC CAGTTGCGCG ACCGCGCGCA CGTCCTGCGT GTCGAGCTCG ACAGTACCAA AAAGCAGGCG ACGGGCGTCA CCTACCTGGA CAGCAATGGC GATACGGTGT TCCAGCCCGC CGACCTGGTC GTCGTCGCGG CGTTCCAGTT CCACAACGTG CATCTGATGC TGCTGTCGGG GATCGGCAAG CCCTACGACC CGGTGGCGAA CGAGGGCGTG GTGGGGCGCA ATTTCGTCTA CCAGAACGTC ACCACCACCA CGGCGTGGCT CGACAAATCG GTTTATACCA AACAGTTTAT CGGAACCGGC GGCGGCGGCG TCGCCTTCGA CGATTTCAAC AGCGAGAATT TCGACCACGG GCCGCTGGGC TTCGTCGGCG GGTCGCCCGT GTGGGTGAAC CAGGCCGGCA TCAAGGCCAT CGCCGCCGCC AAAAGTGGCG GTCCGCCGGG CACGCCACGT TGGGGGTCGG CGTGGAAGAA GGCCATGGTC GATACCTACC GGCATTCGGT CCGCATGGAT GCGCACGGGT CCAACATGGC CTATCGCGAC GTGTATCTGG ACCTGGACCC GACATGGAAG GACGCGTACG GCCTGCCCCT GCTGCGCATG ACCTTCGACT GGAAGGACAA TGACATCCGC ATGAACCGGT ACGTCGTCGG CCAGATTGCC AAGGTGACCC GGGCGATGGG CGCGCGCGAC GTGCATTTCG GCCAGCGGCA GCCGGACGAG CATTTCGACA CGCGCTATTA CCAGACGACG CACCTGGCCG GTGGCGCCGT CATGGGCGCC GACCCGAAGA CCAGCGCGCT GAACCGCTAT CTGCAAAGCT GGGACGTGTC CAACGTGTTC GTCATCGGCG CCAACGCCTT CCCGCAGGGA ACGGGCTACA ACCCCACGGG CATGGTGGCG GCCCTGGCCT ACTGGTCGGC GTATCATATC CGCACGACCT ACCTGAAGAA CCCCGGCCCG CTGGTGCAGA TCTGA
|
Protein sequence | MANITMKSVD AVVVGGGWAG SIMAKELTEA GLNVVMLERG ADRSTASDGA YPGSIDELQG NFRHKIFQDL SRSSVTIRNN SSQTALPYRQ MAAFLPGEGV GGAGLHWSGV HFRMPPDDLI LRSKVKEKYG EKFIPEGMNL QDYGVTYDEL EPFFDKAEKV FGTSGEAYTV NGQVVGKGNV FAPSRSDHFP LPALKDVYGA SLFRRAAAEV GFHPYAMPAA NASAQYTNSY GVQMGPCNFC GYCSGYACYM YSKASPNVNI LPVLRTDPKF QLRDRAHVLR VELDSTKKQA TGVTYLDSNG DTVFQPADLV VVAAFQFHNV HLMLLSGIGK PYDPVANEGV VGRNFVYQNV TTTTAWLDKS VYTKQFIGTG GGGVAFDDFN SENFDHGPLG FVGGSPVWVN QAGIKAIAAA KSGGPPGTPR WGSAWKKAMV DTYRHSVRMD AHGSNMAYRD VYLDLDPTWK DAYGLPLLRM TFDWKDNDIR MNRYVVGQIA KVTRAMGARD VHFGQRQPDE HFDTRYYQTT HLAGGAVMGA DPKTSALNRY LQSWDVSNVF VIGANAFPQG TGYNPTGMVA ALAYWSAYHI RTTYLKNPGP LVQI
|
| |