Gene Gdia_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1160 
Symbol 
ID6974564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1297988 
End bp1299646 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content68% 
IMG OID643390689 
Productputative glucose-methanol-choline oxidoreductase 
Protein accessionYP_002275558 
Protein GI209543329 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCACC CCGTCTTTTC CAGTTCCGGT GACGTGACGG CCGATGTCGT GATCGTGGGC 
TCCGGCGTCG TCGGGGCGAT GATCGCCCAC CAGATGGCCG CCGCCGGGCA TTCGGTCCTG
GTGCTGGAGG CCGGCCTGCG GCTGAAGCGA TCGGACATCG TCGAGAACTG GCGGAACATG
TCGTTCCACA ACCGGGTCCA ATCCGATTTC CAGGGCCTGT ATCCCCAGGC GCCGCTGGCC
CCGGCCCCGC TCTATTTCCC GGCCAACGAC TATGTCGGGC TCAGCGGCCC GGACGGGTCG
GCGTTCCAGC AGGGATATCT GCGCACCGTC GGCGGCACCA CGTGGCACTG GGCGGCGTCG
TGCTGGCGCC ACCTGCCGGT CGACTTCCAG ATGAAGACCC GGTACGGCGT GGGTCGCGAC
TGGGCGATTT CCTACGACGA CCTGGAACCC TATTACTGCC GCGCGGAAGA GGCGATGGGC
GTTTCCGGCC CGCACGACCC GGACCTGCAG TCCCCGCGCG AACGCAGTCG CCCCTATCCG
CGCGACATGA TTCCGTTCGG CTATGCCGAT CGCCGCGTCG CCGAACTGGT CAACCCGCAC
GGGTTCCATC TGGTACCGAT CCCGCAGGGA CGCAGCATCC AGCCGTTCGA GGATCGTCCG
TCATGCTGCG GCAACAATAA CTGCCAGCCG ATCTGCCCCA TCGGGGCGAT GTATAACGGC
ATCCAGCACG TGGTGAAGGC GGAAGATGCC GGCGCGGTCG TGCTGGACCA GGCCGTCGCC
TACCGGATCG ACACCGACGA GGCGAACCGT ATCACCGCCA TTCACTGGTA CGATGCGGAG
CGGACGTCGC ACAAGGCATC GGGGCGCATG TTCGTCCTGG CCTGCAACGG CATCGAAACG
CCGCGCCTGC TGCTGCTGGC GGCCAATGCG CGCAACCCCA AAGGCATCGC CAATTCGTCC
GACCAGGTCG GGCGCAACAT GATGGACCAT TCGGGCGTGC ATGCGACGTT CCTGGCGAAC
GAGCCGCTCT GGTTCGGCCG CGGCCCGGCG CAGAGCAGTT GCATCGTCGG CCCGCGTGAT
GGCGGCTTCC GCAGCACCTA TTCCGCCAAC AAGATGATCC TGAACAATAT CAGCCGCGTC
GCGCCCGCCA CGCAGCAGGC CCTGGCCCTG GGCCTGGTCG GCCAGGCGCT GGACGACGAA
ATCCGTCGCC GGGCGGCGCG CGGCGTGGAC CTGTCGGTCA GCCTGGAGCC CTTGCCCGAT
CCGAACAACC GCCTGACCCT GAGCCGCACC CGGCGCGACC CGCTGGGACT GGCGTGCCCG
GACATCCATT ACGATGTCGG CGAGTATGTG CGCAAAGGCG CCGTGGCCGC CGCCGACCAG
ATTCGGCAGG TGGCCGCCCT GCTGGGCGGC AGCGAATTGC GGATCACCAC CTCGTTCAAT
GCCAACAACC ACATCATGGG TGGCGCGATC ATGGGCCGCG ACCCGAAGGA TTCGGTGGTG
GACGGTGACT GCCGTGCCCA TGACCATCCG AATCTGTGGC TGCCGGGCGG CGGCGCGATG
CCGTCGGCCA GCGTCGTCAA CACGACGCTG AGCATGGTGG CGCTGGGCCT CAAGGCCGCC
GACGCCATGC GGGCCGACCT CCAGGGGGGA CGGGCATGA
 
Protein sequence
MAHPVFSSSG DVTADVVIVG SGVVGAMIAH QMAAAGHSVL VLEAGLRLKR SDIVENWRNM 
SFHNRVQSDF QGLYPQAPLA PAPLYFPAND YVGLSGPDGS AFQQGYLRTV GGTTWHWAAS
CWRHLPVDFQ MKTRYGVGRD WAISYDDLEP YYCRAEEAMG VSGPHDPDLQ SPRERSRPYP
RDMIPFGYAD RRVAELVNPH GFHLVPIPQG RSIQPFEDRP SCCGNNNCQP ICPIGAMYNG
IQHVVKAEDA GAVVLDQAVA YRIDTDEANR ITAIHWYDAE RTSHKASGRM FVLACNGIET
PRLLLLAANA RNPKGIANSS DQVGRNMMDH SGVHATFLAN EPLWFGRGPA QSSCIVGPRD
GGFRSTYSAN KMILNNISRV APATQQALAL GLVGQALDDE IRRRAARGVD LSVSLEPLPD
PNNRLTLSRT RRDPLGLACP DIHYDVGEYV RKGAVAAADQ IRQVAALLGG SELRITTSFN
ANNHIMGGAI MGRDPKDSVV DGDCRAHDHP NLWLPGGGAM PSASVVNTTL SMVALGLKAA
DAMRADLQGG RA