Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1160 |
Symbol | |
ID | 6974564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 1297988 |
End bp | 1299646 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643390689 |
Product | putative glucose-methanol-choline oxidoreductase |
Protein accession | YP_002275558 |
Protein GI | 209543329 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCACC CCGTCTTTTC CAGTTCCGGT GACGTGACGG CCGATGTCGT GATCGTGGGC TCCGGCGTCG TCGGGGCGAT GATCGCCCAC CAGATGGCCG CCGCCGGGCA TTCGGTCCTG GTGCTGGAGG CCGGCCTGCG GCTGAAGCGA TCGGACATCG TCGAGAACTG GCGGAACATG TCGTTCCACA ACCGGGTCCA ATCCGATTTC CAGGGCCTGT ATCCCCAGGC GCCGCTGGCC CCGGCCCCGC TCTATTTCCC GGCCAACGAC TATGTCGGGC TCAGCGGCCC GGACGGGTCG GCGTTCCAGC AGGGATATCT GCGCACCGTC GGCGGCACCA CGTGGCACTG GGCGGCGTCG TGCTGGCGCC ACCTGCCGGT CGACTTCCAG ATGAAGACCC GGTACGGCGT GGGTCGCGAC TGGGCGATTT CCTACGACGA CCTGGAACCC TATTACTGCC GCGCGGAAGA GGCGATGGGC GTTTCCGGCC CGCACGACCC GGACCTGCAG TCCCCGCGCG AACGCAGTCG CCCCTATCCG CGCGACATGA TTCCGTTCGG CTATGCCGAT CGCCGCGTCG CCGAACTGGT CAACCCGCAC GGGTTCCATC TGGTACCGAT CCCGCAGGGA CGCAGCATCC AGCCGTTCGA GGATCGTCCG TCATGCTGCG GCAACAATAA CTGCCAGCCG ATCTGCCCCA TCGGGGCGAT GTATAACGGC ATCCAGCACG TGGTGAAGGC GGAAGATGCC GGCGCGGTCG TGCTGGACCA GGCCGTCGCC TACCGGATCG ACACCGACGA GGCGAACCGT ATCACCGCCA TTCACTGGTA CGATGCGGAG CGGACGTCGC ACAAGGCATC GGGGCGCATG TTCGTCCTGG CCTGCAACGG CATCGAAACG CCGCGCCTGC TGCTGCTGGC GGCCAATGCG CGCAACCCCA AAGGCATCGC CAATTCGTCC GACCAGGTCG GGCGCAACAT GATGGACCAT TCGGGCGTGC ATGCGACGTT CCTGGCGAAC GAGCCGCTCT GGTTCGGCCG CGGCCCGGCG CAGAGCAGTT GCATCGTCGG CCCGCGTGAT GGCGGCTTCC GCAGCACCTA TTCCGCCAAC AAGATGATCC TGAACAATAT CAGCCGCGTC GCGCCCGCCA CGCAGCAGGC CCTGGCCCTG GGCCTGGTCG GCCAGGCGCT GGACGACGAA ATCCGTCGCC GGGCGGCGCG CGGCGTGGAC CTGTCGGTCA GCCTGGAGCC CTTGCCCGAT CCGAACAACC GCCTGACCCT GAGCCGCACC CGGCGCGACC CGCTGGGACT GGCGTGCCCG GACATCCATT ACGATGTCGG CGAGTATGTG CGCAAAGGCG CCGTGGCCGC CGCCGACCAG ATTCGGCAGG TGGCCGCCCT GCTGGGCGGC AGCGAATTGC GGATCACCAC CTCGTTCAAT GCCAACAACC ACATCATGGG TGGCGCGATC ATGGGCCGCG ACCCGAAGGA TTCGGTGGTG GACGGTGACT GCCGTGCCCA TGACCATCCG AATCTGTGGC TGCCGGGCGG CGGCGCGATG CCGTCGGCCA GCGTCGTCAA CACGACGCTG AGCATGGTGG CGCTGGGCCT CAAGGCCGCC GACGCCATGC GGGCCGACCT CCAGGGGGGA CGGGCATGA
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Protein sequence | MAHPVFSSSG DVTADVVIVG SGVVGAMIAH QMAAAGHSVL VLEAGLRLKR SDIVENWRNM SFHNRVQSDF QGLYPQAPLA PAPLYFPAND YVGLSGPDGS AFQQGYLRTV GGTTWHWAAS CWRHLPVDFQ MKTRYGVGRD WAISYDDLEP YYCRAEEAMG VSGPHDPDLQ SPRERSRPYP RDMIPFGYAD RRVAELVNPH GFHLVPIPQG RSIQPFEDRP SCCGNNNCQP ICPIGAMYNG IQHVVKAEDA GAVVLDQAVA YRIDTDEANR ITAIHWYDAE RTSHKASGRM FVLACNGIET PRLLLLAANA RNPKGIANSS DQVGRNMMDH SGVHATFLAN EPLWFGRGPA QSSCIVGPRD GGFRSTYSAN KMILNNISRV APATQQALAL GLVGQALDDE IRRRAARGVD LSVSLEPLPD PNNRLTLSRT RRDPLGLACP DIHYDVGEYV RKGAVAAADQ IRQVAALLGG SELRITTSFN ANNHIMGGAI MGRDPKDSVV DGDCRAHDHP NLWLPGGGAM PSASVVNTTL SMVALGLKAA DAMRADLQGG RA
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