Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1119 |
Symbol | |
ID | 6974523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 1256919 |
End bp | 1258709 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643390648 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002275517 |
Protein GI | 209543288 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.538016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTTC CCGAGACCCA TCCCGCCCTT CGGCGCGCGC TAGACGCGCG CGGCTATGAA GAGCCGACCC CCGTCCAGAA AGCCGTGCTG GATGTCGCGG CGGACGGAAG GGACCTGCTG GTGTCGGCGC AGACCGGATC GGGCAAGACG GTGGCGTTCG GCCTGGCGAT GGCCGACACG CTGCTGGGCG GGGCCGAACG GTTCGGCCCG GCCGGCGCCC CGCTGGCCGT CATCATCGCC CCCACCCGCG AACTGGCCAT GCAGGTCCAG CGCGAACTGT CCTGGCTGTA CGCCCCGGCC GGCGCGCGCA TCGTGTCGTG CATCGGCGGC ATGGATGCGC GGCGCGAAGC CCGGGCCCTG GAAATCGGCG CGCATATCGT CGTCGGCACC CCCGGGCGGC TGTGCGACCA CCAGTCGCGC GGACGCCTGG TCCTGTCCGA ACTGCGTGTC GTGGTGCTGG ACGAAGCCGA CGAAATGCTG GACCTGGGCT TCCGCGACGA ATTGCAGCAA TTGCTCGATG CGATGCCCGA CACGCGGCGG ACGCTGCTGT TTTCGGCCAC CATCGCCAAG GACATCGCCA CCCTGGCCCG CCGCTACCAG CGCGACGCGC TGCGGATCGA CACGCTGTCC GGCGCCCGGC AGCACGCCGA CATCACCTAT CGCGCCGTGA TGGCCGACCC GCGTGAGATC ATTCCGGCCG TCGTCAACAT CCTGCGCTTC ACCGACAGCC CGACCGCCAT GGTGTTCTGC GCCACGCGCG AACTGGTGCG CCACATGCAG GGCGCGCTGC TGGAACGCGG CTTTTCGTCG GTCGCGCTGT CGGGCGAACT GGGGCAGAGC GAGCGTACCC GCGCGATCGA AAGCCTGCGC ACCGGGCAGG CGCGGGTCTG CGTCGCCACC GACGTCGCAG CGCGCGGCAT CGACATTCCC GCGCTCAGCC TGGTGGTGCA TGCCAGCCTG CCGACCGACA GCGCCACCCT GCTGCATCGT TCGGGCCGTA CCGGCCGCGC CGGGCGCAAG GGCGTATGCG CCCTGATCGT GCCGGTTTCG ATGCGCCGGC GCGCCGAGCG GCTGCTGACG ATGGCGAAGG TCTCGGCCGA ATGGACCGCC GTGCCGACCG CCGAGGCGAT CCGCGCCCAG GACGCCGAGC GCCTGCTGAC CGACCCGATC CTGACCGAGG GCGCGGCCCC GGGCGACGAA GACCTGGTCG CCCGCCTGGC CGAAAACCGC AGCGCCGAGC AGCTGGCCGC CGCCCTGCTG CAGATGTACC GCGCCCGCCT GCCGGACCCC GAGGATATCC GCCCGCTGCG CGTCGAGGCA CCCCGTGCCC CGCGCGAGGG CGATTATGCC CGCCGCAAGG AACAGGGCCC CCGCGAGGAC CATGCGCCGC GTGGCGGACC GGGTGCGTGG TTTTCCATGA GCGTCGGCCG CCAGGACAAG GCCGACCCGA AATGGCTGGT GCCGCTGATC TGCCGTCTGG GCGGGGTGCG CAAGAACGAT ATCGGCGCGA TCCGCATCGC CGACGACCAC ACGCTATTCG AAATCGCGAC GGAATCGGCC GAGCGCTTCA CCGCCTGCGT CGCCGCGACC GATTCCGACG AGGTGCGGAT CAGCGCGGCC AAGGCCCCGG CGGGCGGCCC CCGTGGCGTA AGTGGCGAAC GCGGCTATGC CCCGCGCAAG CCCGCGGGCA AGGCCGGCTA TCCGCACGGA CCGCGTGCCG GTCGTGCACC GGCGGGCGCC ACGCGCGGCG CGCCCTCGTC ACGCAAGCGG GCGCCGTCGC GCGCGTCGTA G
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Protein sequence | MPFPETHPAL RRALDARGYE EPTPVQKAVL DVAADGRDLL VSAQTGSGKT VAFGLAMADT LLGGAERFGP AGAPLAVIIA PTRELAMQVQ RELSWLYAPA GARIVSCIGG MDARREARAL EIGAHIVVGT PGRLCDHQSR GRLVLSELRV VVLDEADEML DLGFRDELQQ LLDAMPDTRR TLLFSATIAK DIATLARRYQ RDALRIDTLS GARQHADITY RAVMADPREI IPAVVNILRF TDSPTAMVFC ATRELVRHMQ GALLERGFSS VALSGELGQS ERTRAIESLR TGQARVCVAT DVAARGIDIP ALSLVVHASL PTDSATLLHR SGRTGRAGRK GVCALIVPVS MRRRAERLLT MAKVSAEWTA VPTAEAIRAQ DAERLLTDPI LTEGAAPGDE DLVARLAENR SAEQLAAALL QMYRARLPDP EDIRPLRVEA PRAPREGDYA RRKEQGPRED HAPRGGPGAW FSMSVGRQDK ADPKWLVPLI CRLGGVRKND IGAIRIADDH TLFEIATESA ERFTACVAAT DSDEVRISAA KAPAGGPRGV SGERGYAPRK PAGKAGYPHG PRAGRAPAGA TRGAPSSRKR APSRAS
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