| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1019 |
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| Symbol | |
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| ID | 6974416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1149511 |
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| End bp | 1152993 |
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| Gene Length | 3483 bp |
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| Protein Length | 1160 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643390541 |
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| Product | helicase domain protein |
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| Protein accession | YP_002275417 |
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| Protein GI | 209543188 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.180274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTCG GACAACTCCA GCCAAGCGCT CATGTTCGTG GCCTTGATAC TGGCGGAATA
GCTGAAATCA TTCAGGTGCG AAGTTTCGGA CCTGATGCGC TCAATCTTGT TTTTCGGGTC
AATGGAAAAA TCGGCGAACG GCTGCTGTAT CGAGGCGATG AGATTCCGTT CGAGCTTGTC
CAGCCTGGTC GAGCCTATGC GTTCGATGCG GACGGTGCAC TCCTGCGCCT TGTGTCGGAA
GCGTGGCGTC TGCGTCTTGC ACATCTGTTT GACCCCTATC TCGCGATTAC GCTGTCACGT
ATTGAAGCGC TCCCGCACCA GATCACTGCC GTTTATGGCG CGATGCTGCC GCGCCAGCCG
CTGCGCTTCC TGCTTGCTGA CGATCCGGGC GCTGGCAAGA CCGTCATGGC GGGCCTGCTG
ATCAAGGAAC TGCTGATCCG GGGGGATATG GAACGCTGCC TGATTGTTGC GCCGGGCAGT
CTGGTCGAGC AATGGCAGGA AGAACTCGCG GAAAAGTTTG CCCTCTCGTT TGATCTTCTG
ACCCGTGATC AGGTTGAAAA CTCTGTCACG GGAAATCCTT TTGCCGAGCG TAACCGTTTT
ATTCTTCGCC TCGACATGGC GGCTCGTTCT GATGCCCTTC AGGCACGTCT GAAAGCCGCG
CCTGAGTGGG ATCTCGTGAT CTGTGACGAA GCACACCGCA TGTCCGCTTC CTATTTCGGC
GGGGAGGTAA AAGAGACAAG ACGCTACAAA CTCGGAAAGC TTCTCGGAGC ACACACACGC
AATCTGCTTC TGATGTCGGC AACGCCCCAC AATGGCAAGG AAGCCGACTT CCAGCTTTTC
ATGGGTCTTC TGGACTCCGA CCGATTCGAA GGACGCTTTC GCGAAGGCGT GCGGAAAGCG
GACGTCTCGG ACATGATGCG TCGTCTGACG AAGGAAGAGC TGTTCCGCTT TGATGGCACG
CCACTTTTCC CCGAGCGTCG CGCCTACACC GTTGCCTACG AACTCTCTCC GGCTGAAGCT
GATCTTTATC AGGCCGTTAC CTCTTACGTT CGCGAGGAAA TGAACCGTGC CGACAGGATC
GGAGACGGTC AAAGGCAGGG CAATGTCGGT TTTGCTCTCC AGATTCTTCA GAGACGCCTG
GCCTCATCCG CCGCTGCAAT ACACCGCTCG CTGGAGCGAC GCCGTAAACG GTTGGAAGCG
CGGCTCCGTG AGGAACGGCT CCATCGGGAC AGCATCCTGC GCCACCACAC ACCGTCAGAT
GATCTCGACG ATCTGGATGA GGCGACGGCA ACCGAAGCGG AAGATATGGA GGACACGATC
GCCGATCGGG CCACCGCTGC GGCTACAGTT GCGGAACTTG AAGCCGAAAT TCTGATTCTG
CGTGACATTG AAGAGCAGGC TCTGCGTCTC AAGCTGTCCG GCGAGGACAC GAAATGGCGC
CAGCTTGAGG CCATATTAGA TGATCCGATT ATGGTTGATT CCCATACCGG TGCCCGACGC
AAGATTCTGA TCTTTACCGA ACCCAAGGAC ACGCTGGAAT ATCTCCGTGA CAGGATAGCC
GCCCGTACTG GAGAACCTGA CTCCGTTGTC GTAATTCATG GCGGGATCAC ACGCGAGGCA
AGACGTGCAG CCGTGGCTGC CTTCAATTCT GATCCGGCGG TGCGGGTCAT GATCGCCAAC
GATGCTGCCG GTGAAGGCGT CAATCTCCAG CGTGGCGCTC ATCTGATGGT CAATTATGAC
CTGCCTTGGA ATCCCAACCG GATTGAGCAA CGGTTTGGAC GCATCCATCG TATCGGTCAG
ACAGAAATCT GCCACTTATG GAACCTCTGT GCTGTCAATA CACGCGAGGG CGAAGTCTAT
CAGCGTCTTC TCGACAAGCT GGAAGAAGCC CGGGCCGCGC TTGGTGGCAA GGTGTACGAC
GTACTGGGTG ACCTCTTCGA GGGCAACGCC TTGCGCGATC TTCTGGTTGA GGCAGTCCGT
TACGGGGACC GGCCGGAAAT CCGCGCACGT CTGTTCCAGT CGGTGGAAAA CGCTGTCGAT
GTGGACGCCA TCAACAGGCT TGTCGAAGAA CGCAAACTCA CGTCCGAGGG TATGGCCGCA
ACCTCAGTCG CCGCGATCCG CGACCAGATG GAGCGGGCCG AGGCCATGCG CCTGCAGCCC
CATTTTGTCG GCGCTTTCTT TCGTGAGGCT TTTTCCCTTC TCGGCGGCAG GATGTCTGAA
CGCGAGGCCG GTCGTTTTGA AGTCATGCGT GTCCCCTCCG CTCTCAAGCA CCGCGACCGC
CTTATTGGGC GAGGTGACCC GGTTCTGGAT CGTTATGCAC GGGTTGTGTT CGATAAATGC
CTGATCGCAG GTCGTCCACA GGCCGAATTG CTCGCTCCCG GGCATCCACT CTTCGAGGCC
ACTCTCGACC TTACGTTGGA ACGCTTCCGT CCACTCCTTC AACAGGGCGC AATCCTCATT
GATGAGGCCG ATGAAAGCGT AGAGCCGCGC CTCTTGGCCT ATCTCGAACA TGCCATTCGC
GATGGGCGCT CCACGCCATC CGGCGAGCCG CGCGTGATCT CCCAGCGCCT GCAGTTTGTC
TATCTGGGTG AGGATGGCTC GGCGCAGGAT GGTGGCCCGG CGCCCTATCT GGACACGCGC
CCAGCGACCG AGGCCGAACG TGCGGCTCTC AGCGAGATCG CACAGGCTTC CTGGCTTTCG
GGCCAGGTGG AAGAACGCGC CATCACCTAT GCCATAGCCC ATCTCGTACC AGCCCATTTG
CAGGAAGTGC GGACGCGCCG CCTGCCGGAA ATCAACAAGA TCGAGCATGA GGTGCGCGCC
CGCCTGACAC GCGAAATCAA CTACTGGGAT GCCCGTGCAG CCCGCCTGCG CGAAGAGGAA
CGGGCTGGCA AGGATCAGCG CATCAACGCC TCCAATGCGG AGGCGACAGC CCAGCGCCTG
ACAGACCGTC TCTATAAACG GCAGACGGAG CTGGATCGGG AACGTCAGAT CAGCCCGCTT
TCTCCGGTCC TCCGGGGGGC TGCCCTGATT ATCCCCCGTG GCCTGCTGGA GCAGCGAAAT
GCGCTTCCGG TCACGCCGAT GGCGTTCTCG GAAGACCCGA TCGCCCGTGC CGAGATCGAA
CGTTATGCGA TGCTGGCCGT GATTACAGCC GAGCGCGCAC TCGGAAACGA TCCGCGTGAT
GTGTCAGCCG AGAAAAAAGG CTGGGACATT GAAAGTCGGG ATGGAACAAC CGGCCACCTC
CGGTTCATTG AGGTCAAGGG CCGTCATGCT GACGGAACCC ATATCATCGT GACCAAAAAC
GAACTACTCG CCTCGCTCAA CAGCCCGGAC GCCTACATCC TTGCCGTGGT GCGTGTGGAA
AGCGGCTTTG CCCATGCACC AGTGTATGTC CGCCGCTTCT GCCACCGTGA GCCCGGCTTC
GGAGAGACCG CTGTCGTGTT CGATATAGAC GATCTTCTGG GACAGGGCGC ACCGCCCTCC
TGA
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| Protein sequence | MEFGQLQPSA HVRGLDTGGI AEIIQVRSFG PDALNLVFRV NGKIGERLLY RGDEIPFELV
QPGRAYAFDA DGALLRLVSE AWRLRLAHLF DPYLAITLSR IEALPHQITA VYGAMLPRQP
LRFLLADDPG AGKTVMAGLL IKELLIRGDM ERCLIVAPGS LVEQWQEELA EKFALSFDLL
TRDQVENSVT GNPFAERNRF ILRLDMAARS DALQARLKAA PEWDLVICDE AHRMSASYFG
GEVKETRRYK LGKLLGAHTR NLLLMSATPH NGKEADFQLF MGLLDSDRFE GRFREGVRKA
DVSDMMRRLT KEELFRFDGT PLFPERRAYT VAYELSPAEA DLYQAVTSYV REEMNRADRI
GDGQRQGNVG FALQILQRRL ASSAAAIHRS LERRRKRLEA RLREERLHRD SILRHHTPSD
DLDDLDEATA TEAEDMEDTI ADRATAAATV AELEAEILIL RDIEEQALRL KLSGEDTKWR
QLEAILDDPI MVDSHTGARR KILIFTEPKD TLEYLRDRIA ARTGEPDSVV VIHGGITREA
RRAAVAAFNS DPAVRVMIAN DAAGEGVNLQ RGAHLMVNYD LPWNPNRIEQ RFGRIHRIGQ
TEICHLWNLC AVNTREGEVY QRLLDKLEEA RAALGGKVYD VLGDLFEGNA LRDLLVEAVR
YGDRPEIRAR LFQSVENAVD VDAINRLVEE RKLTSEGMAA TSVAAIRDQM ERAEAMRLQP
HFVGAFFREA FSLLGGRMSE REAGRFEVMR VPSALKHRDR LIGRGDPVLD RYARVVFDKC
LIAGRPQAEL LAPGHPLFEA TLDLTLERFR PLLQQGAILI DEADESVEPR LLAYLEHAIR
DGRSTPSGEP RVISQRLQFV YLGEDGSAQD GGPAPYLDTR PATEAERAAL SEIAQASWLS
GQVEERAITY AIAHLVPAHL QEVRTRRLPE INKIEHEVRA RLTREINYWD ARAARLREEE
RAGKDQRINA SNAEATAQRL TDRLYKRQTE LDRERQISPL SPVLRGAALI IPRGLLEQRN
ALPVTPMAFS EDPIARAEIE RYAMLAVITA ERALGNDPRD VSAEKKGWDI ESRDGTTGHL
RFIEVKGRHA DGTHIIVTKN ELLASLNSPD AYILAVVRVE SGFAHAPVYV RRFCHREPGF
GETAVVFDID DLLGQGAPPS
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