Gene Gdia_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1011 
Symbol 
ID6974408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1138927 
End bp1139193 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content70% 
IMG OID643390533 
Productputative conjugal transfer protein; TrbD 
Protein accessionYP_002275409 
Protein GI209543180 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5268] Type IV secretory pathway, TrbD component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGG ACAGCATTCC CGGCTTCACC GCCCCGGTGC ATCGCGCCCT GATCGAGCCG 
ATCCTGCTCG GCGGCGCACC GCGCACGGTG GCCATCGTCA ACGGCACGCT GGCCGCCGCC
ATCGGGCTCG GCCTGCGGCT CTGGATCGCA GGCGGCCTCT TCTGGCTGGT GGGTCATTTC
GCCGCCGTCT GGGCGGCAAA ACGCGATCCG GCCTTCGTCG ATGTGGTGCG ACGGCATCTG
CGTTACCCCA CCCATCTGGT CGGGTGA
 
Protein sequence
MEPDSIPGFT APVHRALIEP ILLGGAPRTV AIVNGTLAAA IGLGLRLWIA GGLFWLVGHF 
AAVWAAKRDP AFVDVVRRHL RYPTHLVG