| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1007 |
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| Symbol | |
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| ID | 6974404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1134214 |
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| End bp | 1135473 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643390529 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_002275405 |
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| Protein GI | 209543176 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGG GCACCGGCGT CATCGACAAT TTCCTTGCCA TCTTCACCCA GTATATCGAT
TCCGGCTTCG GGCTGGTGCA GGGCGACGTC CACTGGCTCG CCGGTGTGCT GATCACCATC
GACATCACCC TGGCCGGGCT GTTCTGGGCG CTGGCGCCGG ATGAGGACGT GCTGGCGCGG
CTGGTCCGCA AGACCCTGTT CATCGGTATG TTTGCCTTCA TCATCGGGAA TTTTAACGGT
CTCGCCCGCA TCATCTATGA ATCCTTCGCA GGCCTCGGCA TCGAGGCTGG TGGTGGCCAT
CTCACCCAGG CGCAGCTTCT CCAGCCGGGG CGGCTGGCGC AGGTTGGCAT CGATGCCGGC
AAGCCGATCC TGACCTCGAT TTCCTCGCTG GTCGGTTTCG TCGCCATCTT CAACAACGCA
ATCCAGATCG TGGTGCTGCT GCTCGCCTGG CTGATCGTGG TCATCAGCTT CTTTGTCATG
GCGATCCAGC TTTTCGTGGC GCTGATCGAG TTCAAGCTGA CCACGCTCGC CGGGTTCGTG
CTGGTGCCCT TCGGACTATT CGGCCGCACC GCCTTCCTCG CCGAGAAGGT GCTGGGCAAT
GTGGTGTCGT CCGGGATCAA GGTGCTGATG CTGGCCGTCA TCGTCGGTAT CGGTTCGACA
GTGTTCGGCC AGTTCACCAG CGGCTTCAAT AATCCGCCCA CCATCAACGA CGCGCTGACC
CTGATCCTCG CCTCCCTGAC GCTGCTGGGG CTGACCGTGT TCGGCCCGGC ATTGGCCAAC
GGGCTGATCG CCGGTGGCCC GCAACTCGGC GCGGGATCCG CTGTCGCTAC AGCCGCCGGG
GTCGTTGGTG CCGGCGTGGC CGCCGCATCC GGGGCTGGAC TGGCCGTGGG GGCCGCTGCA
GCCGCAGTGC GTGGCGGGGC CTTTGTCGCG GGCGGCACGA CCGCCGCCTA TCAGGCCGGA
GGTGCGGTCG GTGTTGCGAA AGCCGGACTG TCCGCCGCCG CCAGCCCGTT GCGCCGGGCC
ATGGCCAGTG TCCGCACCAG CTATCAGGTT GGCGGAGCGG CTGCGACTGG CGGGGCGGGT
GGTGCGACCG CTTCTGGTGC TGGCGGTGGC GCGGGTACGG CCGGCAAGCC GCCCGCCTGG
GCCAGCCGGA TGCAGCGCAA CAACCGGATC AAGGGTGGGG CTGAGGCGGC CGCACAGGCG
ATCAAGGGCG GCGACCGGCC CAGTGGTGGC CATGACGTCG ATCTCTCGGA AGGAGAATAG
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| Protein sequence | MQQGTGVIDN FLAIFTQYID SGFGLVQGDV HWLAGVLITI DITLAGLFWA LAPDEDVLAR
LVRKTLFIGM FAFIIGNFNG LARIIYESFA GLGIEAGGGH LTQAQLLQPG RLAQVGIDAG
KPILTSISSL VGFVAIFNNA IQIVVLLLAW LIVVISFFVM AIQLFVALIE FKLTTLAGFV
LVPFGLFGRT AFLAEKVLGN VVSSGIKVLM LAVIVGIGST VFGQFTSGFN NPPTINDALT
LILASLTLLG LTVFGPALAN GLIAGGPQLG AGSAVATAAG VVGAGVAAAS GAGLAVGAAA
AAVRGGAFVA GGTTAAYQAG GAVGVAKAGL SAAASPLRRA MASVRTSYQV GGAAATGGAG
GATASGAGGG AGTAGKPPAW ASRMQRNNRI KGGAEAAAQA IKGGDRPSGG HDVDLSEGE
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