| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1005 |
|---|
| Symbol | |
|---|
| ID | 6974402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 1132545 |
|---|
| End bp | 1133531 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643390527 |
|---|
| Product | P-type conjugative transfer protein TrbG |
|---|
| Protein accession | YP_002275403 |
|---|
| Protein GI | 209543174 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
|---|
| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCC TCAATACCGT CGCGTCGCTC ATGATCCTGC TGGCGCCGCT CGCGGCCTGC
TCATCATGGA AGCCGCCTGC CATCAGATAC GACGATACGC CCCGGCAGGC GGTTCTTACG
CCTGAGCCAC CGAAGCCGGT GCAGGTGGTG ACACTGCCCG AGCCGCTGCC GTTGCCGGGA
CAGCTCAAGC CGATTCCCTA CCGGCATGCG GCACCGGAAG CTGCTGATCC CCATCAGCGG
GTCGAGCATG CCAATAGTGC GGCGCGGGTC CAGCCGACGC GGGCCGGTTA TCTCAATGCG
ATCCAGGTCT ATCCCTTCTC CGAGGGCGCG CTCTATCAGC TCTACGCCGC ACCCGGCGAG
ATCACCGACA TCGCGCTGCA GCCGGGCGAG AAGCTGGTCG GCTCCGGTCC GGTCGCCGCC
GGCGATACCG TGCGCTGGAT CATCGGCGAT ACCGAGAGCG GGGCAGGGGC GTCGAAACGG
ATTCATATCC TGCTCAAACC GACGCGCCCG GATCTGATCA CCAATCTGGT CATCAATACC
GACCGGCGCA CCTACCATCT GGAGCTGCGC TCCGACGAGC GGACCTATAT GGCCTCGGTG
TCCTGGGACT ATCCGCAGGA CCAGATCGTT GCCCTGCGCG GGCAGGATCG GGATTCTGAT
CTTGGCACTC CGGTCGCGAC GGGCGTCGAT CTCGACGCGC TGAATTTCCG CTATCGGATC
GAGGGCGACG AGGTGCCATG GCGGCCGTTG CGGGCCTTCG ATGACGGGCG GCAGGTCTTC
ATCGAGTTTC CGACCGGCAT CGCCCAGGGG GAAATGCCGC CGTTGTGGGT CATCGGCCCG
CAAGGGGACG GCCAGTTGGT GAATTACCGG GTTCGCGGCA ACCGGATGAT CGTCGATCGC
CTGTTCGCGG CAGCCGAATT GCGACTGGGG GCGAAGCACC AGCAGGTGGT GCGCATCGTG
CGCACCGATG GAGCCCGTCG GTCGTGA
|
|---|
| Protein sequence | MRTLNTVASL MILLAPLAAC SSWKPPAIRY DDTPRQAVLT PEPPKPVQVV TLPEPLPLPG
QLKPIPYRHA APEAADPHQR VEHANSAARV QPTRAGYLNA IQVYPFSEGA LYQLYAAPGE
ITDIALQPGE KLVGSGPVAA GDTVRWIIGD TESGAGASKR IHILLKPTRP DLITNLVINT
DRRTYHLELR SDERTYMASV SWDYPQDQIV ALRGQDRDSD LGTPVATGVD LDALNFRYRI
EGDEVPWRPL RAFDDGRQVF IEFPTGIAQG EMPPLWVIGP QGDGQLVNYR VRGNRMIVDR
LFAAAELRLG AKHQQVVRIV RTDGARRS
|
|---|
| |