| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1004 |
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| Symbol | |
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| ID | 6974401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1131388 |
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| End bp | 1132548 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643390526 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_002275402 |
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| Protein GI | 209543173 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGGA GCACCGGTGC GGGGGAGGCG GACAAACCGG CGCCTCCGGT CAGGCCGCCA
GGCGAGATGC GGTTGCGCGT CACGCGACCG CCGGTCACGC GACTGTCGCG CAGGGTGATC
ATGGGGCTGA CGCTGGTGGC GGTGCTCGGT GTCGGGGGCG CGCTCTATGT GGCGCTGAAG
CCCACACCCC GAACGGGCAA GGCCGAACTC TATAATACCG GCAACCGCAC CACACCGGAT
GGACTGGCGA ACCTGCCGGG AGACTATACC CATCCGCCAC GTCTTGGGCC GCCGTTGCCC
GGCGATCTCG GCAGGCCGTT CCTCAAGGCA GGCGTGGGTG CTCCCGGCAT GGCGACACCC
GCCGCACCGG CTGATCCCGA GAAGCAGCGC ATGGCTCAGG AGCAGGAAGC AGCACGGGTC
AGCCACCTGT TCACCCAGAC GCAGGTCGGG CGAAACAGCG CCGCCCCGGT GACGGCCGGC
GCCACCCCGG TTCCGGCAGC CGGTGCTGCC ACCGATCGCA ACCAGGCGTT TCTCGATGGA
CCGGTTGACC AGCGAACCGT CAGCGCCGCG CGTCTGACGA CCGTTCCCAG CCCCTATGTA
ATCCAGGCAG GATCAATCAT TCCCGGTGCG CTGATCACCG GCATCCGCTC TGACCTGCCG
GGTGAGGTGA CGGCCCAGGT GACGGAGAAT GTCTACGACA GCCCGACCGG GCATATCCTG
CTGGTCCCGC AGGGGGCGAA ACTGATCGGC CGCTATGATT CCCAGATCGC CTACGGGCAG
ACGCGAGTGC TGCTGGTCTG GACCCGACTG ATACGCGGTG CGAATGATTC GATTGTGCTG
GAGAACGAGC CGGCTGCCGA TGCGGCAGGG TTTGCCGGGT TGCAGGACCA GACCGACAAT
CATTGGGGCG AGGTGTTCAA GGCCGCGTTG GTCTCGACCG TGCTCAGCGT AGGTTCAGAG
GCCGATATCG GTGGCAGCAA TGGCATCGCC CAGGCGCTGC GCACCGGCGG CTCGCAAGGA
TTTAACCAGA TCGGTGAGCA GATGGTCGGA CGCTCGCTCA ATATCCAGCC CACCAATACG
ATCCGGCGCG GCTTTCCGGT GCGGGTCATG GTGCATCGTG ATCTGGTTCT CTCCCCTTAC
AGACAGGAGG CTTCCCGATG A
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| Protein sequence | MSGSTGAGEA DKPAPPVRPP GEMRLRVTRP PVTRLSRRVI MGLTLVAVLG VGGALYVALK
PTPRTGKAEL YNTGNRTTPD GLANLPGDYT HPPRLGPPLP GDLGRPFLKA GVGAPGMATP
AAPADPEKQR MAQEQEAARV SHLFTQTQVG RNSAAPVTAG ATPVPAAGAA TDRNQAFLDG
PVDQRTVSAA RLTTVPSPYV IQAGSIIPGA LITGIRSDLP GEVTAQVTEN VYDSPTGHIL
LVPQGAKLIG RYDSQIAYGQ TRVLLVWTRL IRGANDSIVL ENEPAADAAG FAGLQDQTDN
HWGEVFKAAL VSTVLSVGSE ADIGGSNGIA QALRTGGSQG FNQIGEQMVG RSLNIQPTNT
IRRGFPVRVM VHRDLVLSPY RQEASR
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