| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1001 |
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| Symbol | |
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| ID | 6974398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1128709 |
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| End bp | 1130187 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643390523 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002275399 |
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| Protein GI | 209543170 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTT CGCTTCCCGC ATCCAAGCTG AACGCCAATC GCACGAGGCA CGGGGGACTA
CTGGCTCCCG CAGTAGCCTT GACCATGACG CTCATGACAA CGGCCTGCGC GGTCGGCCCC
AACTATCATG CACCCGATAC GCATCTTCAG CCCTTCCACA GTGCTGCTGC TGTCGACATG
CGACAAGTCG CCTCGACTCC ACCGTTAGAT ACATGGTGGG AGGGATTTCA CGATCCCGAA
CTAGTCCGCA TAGAACAGCG TGTTCTGACC CAGAACCTTG ATCTCGCGGC CGCAATAGCG
CGCGTCCGCC AATCTCGAGG TGCCGCTGAG GCGGCCACGG CGCGCCTGCT CCCCACCCTG
GATTTCAACC CGCAGGCTTC CGCGAACCGG CTGTCGCAGG AGGGGCTGAT CGGCCATGTC
GTTCGCACCA TACCGAGCTT TCACCGCGAT TATCGCACTT ACGATGTAAG TGGCACCGCA
AGCTGGGAAA TCGACCTGTT CGGCGGCCTA CGACGTGGGC AGGAAGCCGC GCGTGACGAA
GCGGAAGCCG CACAGATGGA GCGTGTGGGG GAACGTATCA CGGTCGCCGC TGACGCGGCG
GACGCCTATT TCCAGATCCG CGGCGACCAA GCCCGCCTGG CCGTCGCGGA AAAACAGATC
ACAGTGGACG CCCATCTACT GGAACTGGTG CGTCAACGGC GAACGAGCGG CGTTTCGAAT
GAGCGGGAAC TGGCCCAGGC CGAGGCGTTA CTGCAATCGG CGCGCCAGAC CGTGCCGCTA
CTCCGCATCG CACTCGAAGC GCAGCTCAAT CGGCTCGACG TACTAATGGG CGCGCAGCCC
GGTACCTATG CCGCCGAACT GGGAACGCCG TCTGAAATTC CGGCCATCCC TGCCATCGGC
GGTACGAACA AACCCACGGA CGTGCTACGC CGCCGACCGG ACATTCTGGC TGCCGAACGC
AGACTGGCGG CATCAAATGC GAGGATAGGC GCGGCACTCG GCGACTATTA CCCCAAGCTC
TCTCTTTCGG GCATCCTCGG CTTTCAGAGC ATCAATCCTC AGCATCTTTT CACGGCACCA
GGGTTTCAGG CTGTCGGATC AGGCGCCATT CGCTGGAGGA TCTTTGATTT CGGCAAAATA
GACGCTGAGG TACAGCAGGC ACGCGGCGCC AATGCTGAGG CTCTCGCGCG TTACCAACTA
ACGGTTCTCC ACGCTGCCGA GGATGTCGAG AATGCTTTCA CAACCCTGGT GCAGACGGAG
CAGCGCACAG ACGACCTGCT GACTGAAGTC GCCTCGCTGA CCCGCGCGCG CGATCTTTCC
CAGCAATCCT TCCAGGCCGG TGTTATTCCT TTGACGGACG TGCTTGACGC AGATCGGCAG
CTTCTTGACT CACAGGACCA ACTGGCCCTC AACCGGGCGA ATGCGGCGCG GGCTGCAGTC
AGTTCGTTCA GGGCCTTGGG GGGAGGCTGG CCGACATGA
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| Protein sequence | MNLSLPASKL NANRTRHGGL LAPAVALTMT LMTTACAVGP NYHAPDTHLQ PFHSAAAVDM
RQVASTPPLD TWWEGFHDPE LVRIEQRVLT QNLDLAAAIA RVRQSRGAAE AATARLLPTL
DFNPQASANR LSQEGLIGHV VRTIPSFHRD YRTYDVSGTA SWEIDLFGGL RRGQEAARDE
AEAAQMERVG ERITVAADAA DAYFQIRGDQ ARLAVAEKQI TVDAHLLELV RQRRTSGVSN
ERELAQAEAL LQSARQTVPL LRIALEAQLN RLDVLMGAQP GTYAAELGTP SEIPAIPAIG
GTNKPTDVLR RRPDILAAER RLAASNARIG AALGDYYPKL SLSGILGFQS INPQHLFTAP
GFQAVGSGAI RWRIFDFGKI DAEVQQARGA NAEALARYQL TVLHAAEDVE NAFTTLVQTE
QRTDDLLTEV ASLTRARDLS QQSFQAGVIP LTDVLDADRQ LLDSQDQLAL NRANAARAAV
SSFRALGGGW PT
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