Gene Gdia_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1000 
Symbol 
ID6974397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1127965 
End bp1128573 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content57% 
IMG OID643390522 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002275398 
Protein GI209543169 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC CTCGTAGCGG ACAACGCGGC CCGGTCGATC ATGAACGCCG GGATCAGATC 
ATGACGGCGG CCATCGAACA TTTTGGGCAT TACGGATACA AGAAGACCAC GATGGCCGAT
CTGGCCGACG CGATCGGTCT GTCGAAAGCT TATATCTACA AATTCTTCGA CTCTAAGAAG
GCGATCGGCG AGGCGATCTG CGCGCTCCAG CACGGCAAGA TGCACGCGGA TCTTCAAGCG
ATCATTGAGG ATAACAAGTC AGCTTCCGAC AGAATGCGCC GGATTTTTCT TGCGCTGGCG
CGCAATACCG TCGCGCTGTT TTCTCATGAG CGTAAACTGC ACGACATCGT CTATTCGGCA
GTGGAGGAAG AGTGGTCGTC CTCCAGGAGC TTTGTCGAGG CTTTGCAGGG CATGGTGGAG
CATCTGATCC ACGAAGGTCG CGAGGGAGGC GAGTTCGAGC GTAAGACGCC TGTTGACGAG
ACCTGTCATG CCATCATGCT AGTCCTGCAG TCGATCTATC ATCCACTCCT GCTCGAACAG
CACATGGACA CGCTGGACGA TGATGCGGCG ACGCTGGCCA GTCTCGTCCT GAGAAGCCTC
GCGCCGTGA
 
Protein sequence
MRTPRSGQRG PVDHERRDQI MTAAIEHFGH YGYKKTTMAD LADAIGLSKA YIYKFFDSKK 
AIGEAICALQ HGKMHADLQA IIEDNKSASD RMRRIFLALA RNTVALFSHE RKLHDIVYSA
VEEEWSSSRS FVEALQGMVE HLIHEGREGG EFERKTPVDE TCHAIMLVLQ SIYHPLLLEQ
HMDTLDDDAA TLASLVLRSL AP