| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0994 |
|---|
| Symbol | |
|---|
| ID | 6974391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 1118847 |
|---|
| End bp | 1120556 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643390516 |
|---|
| Product | Recombinase |
|---|
| Protein accession | YP_002275392 |
|---|
| Protein GI | 209543163 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCG CGCTCTACGC CCGCTATTCC TCCGATAACC AGCGCGACGC TTCGATCGCC
GACCAGCTTC GCGTCTGCCG CACCCACGCG GAGAAACAGG GCTGGACCAT CGTCGAGGAG
TATACCGATC ACGCTATCTC GGGTGCCTCA CTGATGCGGC CCGGGATTCA GGCTCTAATC
GCCGATGCGC AGCGCGGACG GTTCCAGATC GTGCTGGCCG AGGCGATGGA CCGCCTGTCC
CGCGACCAGG AGGACATCGC CGGCGTCTTC AAGCGCATGA ATTATGCTGG CGTGCAGATC
GTCACCCTTT CCGAGGGAGA AGTCTCGCAT CTGCATGTCG GCCTCAAGGG CACGATGAAC
GCCCTCTTCC TGAAAGATCT GGCCGAGAAG ACGCATCGCG GCTTGCGGGG GCGCGTGGAA
CTGGGCAAGT CCGGCGGCGG TAACGCCTAC GGCTACGACG TGGTGCGCAG GCTCGACGCC
AATGGGGAGC CGATCCGGGG CGACCGCACC ATCAATCCCG CAGAAGCGGA CGTGGTCCGT
CGCATCTTCC GCGACTTCGC GGCTGGACTG GGACCGCGCG CGATTGCCTT CCGTCTCAAC
GATGAAGGCA TCCCGGCACC GGGCAGCGGC GCGTGGGGCT TCTCGACCAT CACCGGCAAC
CGGGCACGCG GTACCGGCAT CCTCAATAAC GAGATGTATG TCGGAAAATT GGTGTGGAAC
CGCCAGCGCT TCATCAAGGA TCCCGACACC GGCAAACGTC AGGCCCGACC CAATCCGGAC
TCCGAATGGG TGATTCAGGA GGTGCCGGAA CTGCGGGTCG TCGATCAAGA CCTGTGGGAC
GCGGTCAAGG CGCGGCAGGC CAGCGTCAGC GCCAGTCGGG ACACGCGCGA TACATCATCG
CCCGACCATT TCCGCGAGAA GCGCCGTCCC CGCTACCTGT TCTCCGGCCT GAGCAAATGC
GGCTGCTGCG GTGGCGGCTA TTCGATGATC TCCGGCACAT TGCTCGGCTG CTCGACAGCG
CGCAACAAGG GCACCTGCGA CAACCGGACC AATATGCGTC GCGACGAGCT GGAGCGGCGC
GTGCTCGACG CCCTGCGTCA TCATCTCATG GATCCGGCCC TGTTCGCCGA GTTCTGCACG
GCCTTCACCA ACGAGATGAA CCGGCTGCGC ATGGAAGCGT CGGCCGACAT CGACGCAGCG
AAAACAGAAC TGAAGCGGGT CGAGCGCGAC ATCCAGCGCC TGATGGATCT CTACCTCTCG
GAAGCCATCT CGATCGAGAC GGTCAAGGAG CGCGGCTCCA AGCTCGAAGC CCGCAAGGCA
GAGCTGACAG AGTCCCTCGC GAACGCGGAA GCGCCGCCTC CCCTGCTCCA TCCCCAGATG
GCGGAGTTCT ACCACCGACA GCTCGCGCGT CTGCACGATA TGCTGCATTC CGAACTGGAC
GAGAAACGCC AGGAGGCGGC AGAGGTGATC CGTTCGCTGA TCGAGGCGAT CATCCTCACG
CCATCCGACA AGGGTTTACA GATCGATGTC CGTGGCGATC TCGCCGGCAT CCTGACGGTG
GCGTCGGGCA GCGGACAAAC AAAAACCCCA GCCCGTTTCC GGACTGGGGT TAGTGATGCG
TTGGCATCGC AAGTTCAGAT GGTTGCGGGG GAAGACAACC AACGATACTT GCGATTGGTC
GACCGCGAAA TACCCCTTCT CGCCGCATAA
|
|---|
| Protein sequence | MKVALYARYS SDNQRDASIA DQLRVCRTHA EKQGWTIVEE YTDHAISGAS LMRPGIQALI
ADAQRGRFQI VLAEAMDRLS RDQEDIAGVF KRMNYAGVQI VTLSEGEVSH LHVGLKGTMN
ALFLKDLAEK THRGLRGRVE LGKSGGGNAY GYDVVRRLDA NGEPIRGDRT INPAEADVVR
RIFRDFAAGL GPRAIAFRLN DEGIPAPGSG AWGFSTITGN RARGTGILNN EMYVGKLVWN
RQRFIKDPDT GKRQARPNPD SEWVIQEVPE LRVVDQDLWD AVKARQASVS ASRDTRDTSS
PDHFREKRRP RYLFSGLSKC GCCGGGYSMI SGTLLGCSTA RNKGTCDNRT NMRRDELERR
VLDALRHHLM DPALFAEFCT AFTNEMNRLR MEASADIDAA KTELKRVERD IQRLMDLYLS
EAISIETVKE RGSKLEARKA ELTESLANAE APPPLLHPQM AEFYHRQLAR LHDMLHSELD
EKRQEAAEVI RSLIEAIILT PSDKGLQIDV RGDLAGILTV ASGSGQTKTP ARFRTGVSDA
LASQVQMVAG EDNQRYLRLV DREIPLLAA
|
|---|
| |