| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0968 |
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| Symbol | |
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| ID | 6974365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1092277 |
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| End bp | 1094277 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643390491 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_002275367 |
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| Protein GI | 209543138 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGC CGGGAACACG TATCCAGTGG GGGCAGGCGC TGCTGGTCCT GTCCATGATC
GTGCTGTCCT GGTGGACGGC GACACAATGG ACGGCCTGGG AACTCGCGTT CCAACCGGAA
CTCGGTCAAC CGTGGTTCAC GGTTCTGCAT CGTTGGCCGG TCTACGCTCC GCCGCTTTTT
TTCTGGTGGT GGTACGAGTT CGACGCCTAC GCCCCGGCGG TCTTCGCGCG GGGTGCCTGG
ATCGCGGGTT CGGGCGGGGT ACTGGCCTTC GCAGCCGCCG TGGCGCTGTC CGTCCACCGC
GCCCGCGAGG CGAAGCGCGC CGCGACCTAT GGGTCCGCTC GCTGGGCCGA GGACGCGGAA
ATCCGCGCGG CGGGGCTGCT GGGCGAGGAT GGGGTGGTGC TGGGAAAATA CCGCCGGGCC
TATCTCCGGC ACGATGGTCC CGAGCATGTC CTGACCTTCG CGCCGACGCG TACGGGTAAG
GGTGTAGGCA TGGTGATCCC CACACTTCTG ACCTGGCCGG GCTCGGCCAT CATCCATGAC
ATCAAGGGTG AGAACTGGCA GATCACCGCC GGTTTCCGTG CCCGCTTCGG ACGTGTGCTG
CTGTTCGACC CCACCAATCC GGCGTCCTCG GCCTACAACC CGCTGCTGGA GGTGCGGCGT
GGGGCATCGG AGGTCCGCGA CGTGCAGAAC ATCGCCGATA TTCTGGTCGA TCCGGAGGGT
TCGCTGGAGC GGCGTAACCA CTGGGAGAAA ACCTCCCACG CCCTGCTGGT CGGTGCGATC
CTGCATGTGC TCTATGCCGA GGAAGACAAG ACCCTCGCCG GGGTGGCGAA ATTCCTTTCC
GACCCGAAGC GGTCGATCGA GGCAACTCTG TCCGCCATGA TGCGCACGAA CCATCTGGAC
GGGAAGGGGC CGCATCCCGT CGTGGCCTCA ACGGCACGGG AACTGCTCAA CAAATCGGAC
AACGAGCGCT CCGGCGTGCT GTCCACCGCC ATGTCGTTTC TCGGCCTCTA CCGCGATCCG
GTGGTGGCCA CCGTGACCAG TCGCTGCGAA TGGCGGATCG GCGATCTGCT GGACGGCGAA
CGGCCTGTTT CCCTGTATTT CGTCATCCCG CCCTCGGATA TCAGCCGCAC CAAGCCTCTG
ATCCGCCTGA TCCTCAACCA GATCGGGCGG CGGCTGACGG AGGATCTGTC CGGTCGGGCG
GGGCGGCGTC GCCTGCTGCT GATGCTCGAC GAGTTTCCTG CTCTCGGCAG GCTGGACTTC
TTCGAGAGCG CGCTCGCCTT CATGGCGGGC TACGGGATCA AGGCGTTCCT GATCGCGCAG
TCCCTTAACC AGATCGACAA GGCGTACGGT CAGAACAACA GTATTCTCGA CAACTGCCAT
GTCCGAGTAT CCTTCGCTAC GAACGACGAA CGTACAGCAA AGCGCGTGTC CGACGGTCTG
GGTGTGGCCA CCGAGATCCG GTCGCAGAAG AACTATGCCG GCCATCGGCT GTCGCCTTGG
CTTGGGCATC TCATGGTCTC GCGCCAGGAG AGCGCGCGGC CCCTGATGAC GGTGGGCGAA
GTCATGCAGA TTCCGGCACG GGAGGAGGTG GTCATGGTGG CGGGCTGCCC ACCGATCCGG
GCACGGAAGG CGCGATATTT CCGGGATCGC CGCTTCGTCG AGCGCATCCT GCCGCCGCCC
GATCCTGCAC AATTGCCACG GCCTGTCCGG CCCGATGACT GGAGTGGTCG TCCGTCTCCT
GTCACCCCGC CACCGGAGCA GGTGGGGGCG TCGGCAGCAC CGGATAAACC CGACGACGCC
GATAGTGATG AATCCCTCGG CACGGGACGG AAATGGTCGC GTGAGCATGA TCCGACGGAT
GTCGGCAAAC ACAAGAAGCG TACAGATCCT GACCTCTTTG GCGAGGAACT GCCACCGGAT
CCGGAAGCAC GGGATCGTGC CGACCTGACG CGGATCGGCC GGCAGGCCGG CCTCGACCGT
GGCAATGACC TTGGGCTGTG A
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| Protein sequence | MDQPGTRIQW GQALLVLSMI VLSWWTATQW TAWELAFQPE LGQPWFTVLH RWPVYAPPLF
FWWWYEFDAY APAVFARGAW IAGSGGVLAF AAAVALSVHR AREAKRAATY GSARWAEDAE
IRAAGLLGED GVVLGKYRRA YLRHDGPEHV LTFAPTRTGK GVGMVIPTLL TWPGSAIIHD
IKGENWQITA GFRARFGRVL LFDPTNPASS AYNPLLEVRR GASEVRDVQN IADILVDPEG
SLERRNHWEK TSHALLVGAI LHVLYAEEDK TLAGVAKFLS DPKRSIEATL SAMMRTNHLD
GKGPHPVVAS TARELLNKSD NERSGVLSTA MSFLGLYRDP VVATVTSRCE WRIGDLLDGE
RPVSLYFVIP PSDISRTKPL IRLILNQIGR RLTEDLSGRA GRRRLLLMLD EFPALGRLDF
FESALAFMAG YGIKAFLIAQ SLNQIDKAYG QNNSILDNCH VRVSFATNDE RTAKRVSDGL
GVATEIRSQK NYAGHRLSPW LGHLMVSRQE SARPLMTVGE VMQIPAREEV VMVAGCPPIR
ARKARYFRDR RFVERILPPP DPAQLPRPVR PDDWSGRPSP VTPPPEQVGA SAAPDKPDDA
DSDESLGTGR KWSREHDPTD VGKHKKRTDP DLFGEELPPD PEARDRADLT RIGRQAGLDR
GNDLGL
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