| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0966 |
|---|
| Symbol | |
|---|
| ID | 6974363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 1090685 |
|---|
| End bp | 1091689 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643390489 |
|---|
| Product | P-type conjugative transfer ATPase TrbB |
|---|
| Protein accession | YP_002275365 |
|---|
| Protein GI | 209543136 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
|---|
| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTTA CACCGATTGA AAATGGTGCC CGACAGCGCG GCATGTCCAT GCTGCGCACG
GCGATGGGAC CGGCGATTGC GGGGCATTTG GCGGACCCAG CAGTGGTCGA GGTGATGCTC
AATCCCGATG GGCGGTTGTG GACCGACCGC TTGTCCGAGG GGCTGGGCGA TACGGGCGAC
AGGATTGCAC CTGCCGATGC CGAGCGCATC GTGCGTCTGG TGGCCCATCA TGTTGGGGCC
GAGGTGCATG AAGCGGCACC GCGCGTATCG GCCGAACTAC CAACCGGCGA ACGGTTCGAG
GGGTTACTGC CGCCCGTGGT GACGGCCCCC AGTTTCGCGA TCCGCAAGCC CGCCGTGGCC
GTGTTCACAC TCGACGATTA TGTCGCCGCC GGAATCATGA CGGAGGGGCA GGCGGTGTTT
CTGCGCCGCG CTGTCGTGGA ACGGAAAAAC ATTCTGGTCG CGGGCGGGAC CAGCACGGGC
AAGACCACGT TGGTCAATGC CCTGTTGGCC GAAGTCGCGA AAACCGATGA CCGTGTCGTG
CTGATCGAGG ATACGCGCGA ACTGCAATGC ACAGCACCCA ATCTCATAGC GCTGCGGACC
CGCGAAGGTG TCATCACGCT GTCGGACCTC GTCCGCTCTG GTCTCCGCCT GCGCCCCGAC
CGTATCCCCA TCGGTGAGGT ACGTGGGGCT GAAGCCCTTG ATCTGGTCAA GGCATGGGGC
ACCGGGCATC CCGGCGGCAT CGGCACGCTG CATGCCGGAT CGGTGCTCGC CGCCCTGTAT
CGGCTGGAAC AGTTGATCCA GGAGGCGGTG GTCACGGTGC CGCGCGCCAT GATCGCTGAA
ACGATCGACG TCATCGCGGT CCTGTCCGGG CGCGGCAATT CCCGCCGCCT GTCCGAACTG
GCTGAAATCG AGGGCCTCGA TCCCACGACC GGAACCTATC GCATCCGTCC GGTCAGCCTC
TCGTCTCCCG AAACATCCTT TGCTGCCAAT GGAGAATCAT CATGA
|
|---|
| Protein sequence | MAVTPIENGA RQRGMSMLRT AMGPAIAGHL ADPAVVEVML NPDGRLWTDR LSEGLGDTGD
RIAPADAERI VRLVAHHVGA EVHEAAPRVS AELPTGERFE GLLPPVVTAP SFAIRKPAVA
VFTLDDYVAA GIMTEGQAVF LRRAVVERKN ILVAGGTSTG KTTLVNALLA EVAKTDDRVV
LIEDTRELQC TAPNLIALRT REGVITLSDL VRSGLRLRPD RIPIGEVRGA EALDLVKAWG
TGHPGGIGTL HAGSVLAALY RLEQLIQEAV VTVPRAMIAE TIDVIAVLSG RGNSRRLSEL
AEIEGLDPTT GTYRIRPVSL SSPETSFAAN GESS
|
|---|
| |