| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0963 |
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| Symbol | |
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| ID | 6974360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1087590 |
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| End bp | 1090031 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643390486 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_002275362 |
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| Protein GI | 209543133 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCGC TTGGCGAATA TCGCAACCAG AATTCCCTCC TGTCGGATTT TCTCCCATGG
GCAGCGCTCG TGGAGAAAGG CGTCGTCCTG AACAAGGACG GCAGTTTCCA GCGCACGGCA
AAGATACGCG GTCCCGATCT GGACAGTGCG ACGCCCGCTG AACTGGTGGG TGTCACCGGA
CGCCTGAACA ATGCCCTGCG CCGTCTGGGT TCAGGTTGGG CCGTGTTCGT CGAGGCGCAA
CGCATCCCGG CGACACTCTA TCCCGAGAGC GATTTCCCGG ATGCGGCCAG CCAGATGGTC
GATCTGGAAC GTCGGGAGCA GTTCGAGGAC GAGGGCGCGC ATTTCGAGAG CCGGTATTTC
CTGACCCTGG TCTGGTTGCC ACCGGCGGAA TCGTCAGGGC GTGCTGAGCG TTTTCTGTAT
GAGGGCAGGG AGCGCGATGG GCCGGACCCG CATAACATAT TGAATTCCTT CATCGATCGC
TCCGACCGGC TTCTGGCCCT GCTGGACGGC TTCATGCCCG AAGCGGCATG GCTGGATGAC
GGCGAGACGC TGACCTATCT GCATTCGACG ATTTCCACTC GGCACCAGCG GGTGAGGGTG
CCGGAAATTC CCATGCATCT GGATGCCCTG CTGGTGGATC AGCCTCTGTC GGGTGGTCTG
GAGCCGAAAC TCGGCGATGC GTTTTTGAAA ACCCTGACCA TCACGGGTTT CCCGAGCCGC
ACGTTTCCCG GAATCCTGGA TGACCTGAAT CGGCTGGCGA TGCCCTATCG CTGGTCCACC
CGCGCGATCC TGCTCGACAA GACCGACGCC ACCAAGGTTC TGACGAAAAT CCGTCGCCAG
TGGTTCGCAA AGCGCAAGAG TATTGCCGCC ATCGTGCGCG AGGTCATGAC CAACGAGGCG
TCGGTGCTGG TGGATAATGA TGCCGCCAAC AAGGCGGCCG ACGCCGATCT GGCTTTGCAG
TCCCTCGGTG CCGACGATGT CGGACAGGCG TATCTTACCG CGACCATCAC GGTCTGGGAT
GGCAGCGCCA GCATAGCGGT GGAAAAACTT CGCCTCGTCG AAAAGATCAT CCAGGGGCGC
GATTTCACCT GCATGGCGGA AAGCCTCAAC GCCGTGGAAG CGTGGCTGGG ATCTCTGCCA
GGTCATGTCT ACGCCAATGT GCGTCAGCCC CCGGTCTCGA CACTGAATCT GGCGCATATG
ATTCCGCTCT CTGCCGTGTG GGCCGGGCCG GAACAGGATG GGCATTTCAG GGCAGCGCCG
CTGTTTTATG GCAGGACGGC GGGTGCCACA CCGTTCCGGT TTGCCCTGCA TGTCGGGGAT
GTTGGCCATA CCCTGATTGC AGGACCAACA GGAGCCGGCA AATCTGTCCT ACTGGCGTTG
ATGGCGCTCC AGTTCCGGCG TTATGCGGGA TCGCAGATTT TCGCCTTCGA TTTTGGCGGT
TCGATGCGGG CCGCGACGCT GGCGATGGGT GGTGACTGGC ACGATCTCGG CGGTGGGCTG
ACAGACGCTG ATCCATCGGG AGAACAGGGT GGCAGTGTAT CGCTCCAGCC TCTGGCGCAG
ATTGATGATC CCGATGAGCG CAAATGGGCC AGCGAATGGC TCGGCCAAAT CCTTGTCGGA
GAGAGGGTGA CGCTGATCCC GGAGGTGAAG TCTCACCTCT GGTCGGCGCT GAATTCCCTG
GCGTCATCGC CCAGCCATGA ACGCACGATC TCAGGTCTGG TCGCGCTCCT CCAGTCCAAC
GCCCTGAAGC AGGCTCTGGC CCCATACTGT CTCGGTGGTC CCTATGGCCG CCTGCTCGAC
GCGGACGCTG AGCGGCTGGG AGACGCCGAT GTGGTGGTGT TCGAGACCGA GGGCCTGATC
GGCTCCGGCG CGGCATCATC CGTGCTGTCC TACCTGTTCC ATCGGATCGA AGGCCGCCTG
GACGGCCGGC CGACGCTGCT GGTCATCGAT GAGGGCTGGC TGGTGCTGGA TGACGGCGAT
TTTGCCGGCC AGCTCCGGGA ATGGCTGAAA ACGCTGCGTA AGAAGAACGC CAGCGTCATC
TTTGCCACTC AGTCCCTGTC GGACATTGCC AATTCCCGCA TTGCGCCAGC GGTGGTGGAA
AGCTGCCCCA CGCGGATTTT CCTGCCCAAT GAACGGGCGA TCGAGCCGCA GATCGCGGCC
ATCTATCGCG ATTTCGGCCT CAACGACCGG CAGATCGCCA TCATCGCCCG CGCGGCATCG
AAGCGGGAAT ATTACTGCCA GACGCAGCGG GGAAACCGGC TGTTTGAACT GGGGCTCGGG
CCGGTAGCAC TTGCCCTATG CGCGGCATCC GGCAAGGACG ATCACCGGCA GATCGATGCA
GTGCTGGCGG AACATGGCCG TCCCGGATTT CTCCCGGCCT GGTTTGAGGC GCGTGGCATA
GCGTGGGCTG CGGACCTTCT GCGGGAAGGA TCTGTGTCAT GA
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| Protein sequence | MMSLGEYRNQ NSLLSDFLPW AALVEKGVVL NKDGSFQRTA KIRGPDLDSA TPAELVGVTG
RLNNALRRLG SGWAVFVEAQ RIPATLYPES DFPDAASQMV DLERREQFED EGAHFESRYF
LTLVWLPPAE SSGRAERFLY EGRERDGPDP HNILNSFIDR SDRLLALLDG FMPEAAWLDD
GETLTYLHST ISTRHQRVRV PEIPMHLDAL LVDQPLSGGL EPKLGDAFLK TLTITGFPSR
TFPGILDDLN RLAMPYRWST RAILLDKTDA TKVLTKIRRQ WFAKRKSIAA IVREVMTNEA
SVLVDNDAAN KAADADLALQ SLGADDVGQA YLTATITVWD GSASIAVEKL RLVEKIIQGR
DFTCMAESLN AVEAWLGSLP GHVYANVRQP PVSTLNLAHM IPLSAVWAGP EQDGHFRAAP
LFYGRTAGAT PFRFALHVGD VGHTLIAGPT GAGKSVLLAL MALQFRRYAG SQIFAFDFGG
SMRAATLAMG GDWHDLGGGL TDADPSGEQG GSVSLQPLAQ IDDPDERKWA SEWLGQILVG
ERVTLIPEVK SHLWSALNSL ASSPSHERTI SGLVALLQSN ALKQALAPYC LGGPYGRLLD
ADAERLGDAD VVVFETEGLI GSGAASSVLS YLFHRIEGRL DGRPTLLVID EGWLVLDDGD
FAGQLREWLK TLRKKNASVI FATQSLSDIA NSRIAPAVVE SCPTRIFLPN ERAIEPQIAA
IYRDFGLNDR QIAIIARAAS KREYYCQTQR GNRLFELGLG PVALALCAAS GKDDHRQIDA
VLAEHGRPGF LPAWFEARGI AWAADLLREG SVS
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