| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0955 |
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| Symbol | |
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| ID | 6974352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1079952 |
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| End bp | 1081370 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643390478 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002275354 |
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| Protein GI | 209543125 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGA GGCGCACGGT TTCGGTCCTG GCACTCGTCG CCGTCTCAGG ATGTACCGTC
GGGCCGACTT ATGTCCCGCC CCATACCGAT GCTCCATCAC AATGGGTGGT CCAGCCCGGC
ACTCCCAGCA AGCCGGTTCC GGATGAAATT TGGTGGGCGG GGTTCCACGA TCCACAGCTA
AGCCGCCTCA TCCACGAGGC ACTGACGCGC AACAATGACC TTGCCGCCGC GGAAAAACGT
GTCGAGGCCG CGCGTGAGCA GATCAGGATC GAGGCGGCAG CCTCATCACC CGTCATTGGC
CTTGGCGGCA TCGCCGAGAA CCGACGCCAG TCGCAGACCA TCCAATGGCC CCCCAGAGCG
AATGCCGGGG ACTATCGGTA CTGGTCTCTC GGCTTTGACG GTTCGTGGGA ACTGGACCTG
TTCGGCATGA CGCGACGCCG CACGGAAGCC GCTCGCGCAT CGGCGGCCGA GATGCAAGCC
GAACGCGACG GGTTCCGCCT GCGCCTTCTG GCGGAAGTTG GCGCGGATTA TGTGACCTGG
TGCGCGACCG AGGCGCGGGT GCAGGTCGCG GAGCATCGCG TCTCCCTTGC CATTCGGCAG
CGTGATCTCC TGACACACGA ATGGACAGCC GGTGCGCGCG CCCGCGCCGA TGTCGACCAG
GCCGAGGCGG ACCTCGCGGC CGCGCAACAG ATTGTGCCGC CCCTCATCGC GCAGGCCGCC
CACATGAAGG ACGCCCTGGC GATCCTGACC GCGACGGCAC CGGAAGCGAT GCAACTGACG
CCGCGCGCGG ACCTCTCCAT CCCCATGCCG CCCGCACGGC CACCCTCACT TCCATCCGAG
GTGCTGACGC GCAGGCCGGA TATCCAGAGC GCGACATTTC GCTATGCGCG GGACAATGCC
GAGATCGGAG TCGCAGTCGC CTCCCTCTAC CCGAAAGTCG CAATCCCGCT GGATTTCGGG
GTAACCACCA GCACGCTGCA TCAGGCGTTC ACCACCGCCA GCCTTCTCTG GCAGCTCGGT
GTCACCGCCG GCGAAACGAT CTACGCAGGA GGCCGGCGTA CAGCCCAGAT CGACGCGGCG
CGCCTGCAAC GTGATGCGGC ATGGCTCGGA TATCGGCAGG CCGTGCTTAA CGCGCTGCGC
GATGTGGAGG ACCGGCTCGC CACGGTGGCG GATACTGAAA GTCGGCTCTC GTCCGTAAAT
GTTGAACTGC GTGCAGCCCA GGAAAAACGC GCACATGCGC AACGGCAATT CCACGCTGGG
GAAACTGCCC TGTCATCAGT TCTTGTTCAA GACAGCATGG TGGACAGAAT CCACGATCAG
GCTTTTGCGA CCCGGCAAGA AACAGCACTG GCCAGCATCG CACTCTATAA AGCGCTGGGC
GGAGGCTGGC GTGCTGTCCT TTCGAGGGAT GGCGGATGA
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| Protein sequence | MKMRRTVSVL ALVAVSGCTV GPTYVPPHTD APSQWVVQPG TPSKPVPDEI WWAGFHDPQL
SRLIHEALTR NNDLAAAEKR VEAAREQIRI EAAASSPVIG LGGIAENRRQ SQTIQWPPRA
NAGDYRYWSL GFDGSWELDL FGMTRRRTEA ARASAAEMQA ERDGFRLRLL AEVGADYVTW
CATEARVQVA EHRVSLAIRQ RDLLTHEWTA GARARADVDQ AEADLAAAQQ IVPPLIAQAA
HMKDALAILT ATAPEAMQLT PRADLSIPMP PARPPSLPSE VLTRRPDIQS ATFRYARDNA
EIGVAVASLY PKVAIPLDFG VTTSTLHQAF TTASLLWQLG VTAGETIYAG GRRTAQIDAA
RLQRDAAWLG YRQAVLNALR DVEDRLATVA DTESRLSSVN VELRAAQEKR AHAQRQFHAG
ETALSSVLVQ DSMVDRIHDQ AFATRQETAL ASIALYKALG GGWRAVLSRD GG
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