Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0908 |
Symbol | |
ID | 6974305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 1027148 |
End bp | 1027711 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643390433 |
Product | isochorismatase hydrolase |
Protein accession | YP_002275309 |
Protein GI | 209543080 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.150668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.249325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGC GACGCAAGAT CGCGCTGCTT CTGGTCGACG TGATCAACTC GTTTTTCGAT CCGGGTGAAC CCAATTACTA TCCGGGCGCC GAAGACGTCC TGCCTGTCAT TGCGACCATG CTGCGCGCGG CGCGGCAGCA TGGGCATCTC GTCATCCATG CCGCCGAACG GCACCGGACG TTCCACGATG ATTTCGAGTG GAAGAAACTG CCGATTCACC ATCTGGAAGG CGACCCGAGC ACCGATTTCG TCACCGGGTT CGAGCCTGCC GGACCGGCCG AGGCCGTCAT CTACAAGCGT CGGTACAGCG CCTTCTTCGC CACGGATCTG GCCCTGTTCC TGCATGAGCA GAATGTAACC CATCTCATCA TCGTCGGCGT CAAGACGAAT TGCTGCATCC GCGCCACCGT GCAGGATGCC TTCGCCCATG GCTTCACCCC CATCGTTCCG CGTGAGGCGA CCAGTTCCAA TCGCCCCCAC CTGGCCGAAG CATCGCTGGA AGACATCGCG CGGTATTTCG GCGAGGTCGT GTCGGCAACC GAAGCCGAGA AGATGCTGGG ATGA
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Protein sequence | MTSRRKIALL LVDVINSFFD PGEPNYYPGA EDVLPVIATM LRAARQHGHL VIHAAERHRT FHDDFEWKKL PIHHLEGDPS TDFVTGFEPA GPAEAVIYKR RYSAFFATDL ALFLHEQNVT HLIIVGVKTN CCIRATVQDA FAHGFTPIVP REATSSNRPH LAEASLEDIA RYFGEVVSAT EAEKMLG
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