Gene Gdia_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0872 
Symbol 
ID6974269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp988314 
End bp989297 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content64% 
IMG OID643390401 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_002275277 
Protein GI209543048 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.320863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGACC GACAGAAGGA CCTGATCCAG AAATTCGCGG CCCTGGGCAG CCTGGTCGTG 
ATGATCGTGA TTTTCGCCCT CACGTCGCGC GCGTTCTTTT CGGTAGATAA CGGGCTGACC
GTCGCGCTGC AGACCACGCA GATCGCCTAT CTGGGGATCG GCGCCACCTG CGTGATCATT
ACCGGCGGCA TCGACCTGTC CGTGGGGTCG GTGCTTGCCC TGTCCGGCGT GGTCGCGGCG
CTCGCGGTGA AGGCCGGGGT TCCGGTTCCC CTGGGTTTCG CCATCGGAAT CCTGACCGGC
GGCGCGTGCG GCGCCATCAA CGGGATCATC ATCACATGGA TGAAGCTGCC GCCGTTCATC
GCGACGCTTG GCATGATGAT GGTCGCGCGC GGCGTGGCGT TGCAGATCAC CGGGGCACGG
CCGGTTTCCG GGCTGGGGGA TGCGTTCGGG GTGCTGGGAA ACGGCGCCCT GTTCCGGATC
GTTCGCGACG GCAGCGACGG GTTTCCGAAC GTGGTGTTCG TGGGGATTCC CTATCCCGTC
ATCCTGATGG TCGTGCTCGC CGTGGTCGTG GCCATCATGC TCGGCCGGAT GCCGATCGGA
CGGCATGCCT ATGCCGTGGG GTCCAGCAGC GAGGCCGCGC GGCTTTCCGG CGTCAACGTG
GCGCGGGTCA AGATGGTGGC CTATGGCATG TCGGGGCTGC TGGCCGGGCT GGCCGGATGT
GTCCTGATGT CACGCCTGGT GACCGCGCAG CCGAATGAAG GCATCGCGGC CGAAATGGAT
GCGATCGCCA GCGCCGTGAT CGGCGGTACG TCCCTGATGG GTGGGGTCGG GACGATTTCC
GGTACCATGA TCGGCGCGTT CGTGATCGGC ATCCTTCGCA ATGGCCTGAA CATGAACGGC
GTTTCCTACT TCATCCAGCA GATCGTCATC GGACTGGTCA TCATCGGGAC GGTCTGGATC
GATCAGATGC GAATGAAGCG GTGA
 
Protein sequence
MSDRQKDLIQ KFAALGSLVV MIVIFALTSR AFFSVDNGLT VALQTTQIAY LGIGATCVII 
TGGIDLSVGS VLALSGVVAA LAVKAGVPVP LGFAIGILTG GACGAINGII ITWMKLPPFI
ATLGMMMVAR GVALQITGAR PVSGLGDAFG VLGNGALFRI VRDGSDGFPN VVFVGIPYPV
ILMVVLAVVV AIMLGRMPIG RHAYAVGSSS EAARLSGVNV ARVKMVAYGM SGLLAGLAGC
VLMSRLVTAQ PNEGIAAEMD AIASAVIGGT SLMGGVGTIS GTMIGAFVIG ILRNGLNMNG
VSYFIQQIVI GLVIIGTVWI DQMRMKR