Gene Gdia_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0853 
Symbol 
ID6974250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp969612 
End bp971090 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content71% 
IMG OID643390382 
Productxylulokinase 
Protein accessionYP_002275258 
Protein GI209543029 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID[TIGR01312] D-xylulose kinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.985754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.66346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATC TGGGACTGGA TATCGGAACC ACCGCGACCA AGGCGATCCT GGTCGATGAC 
CGCCAATCGG TCCTGGCCGC CGCCACCGTC GCGTCGCGGA TCGATCAGCC TGCCCCGGGC
CTGAGCGAGC AGGACCCCGA TACATGGATC GCCGGCGTGC GCCTGGCGCT GGCCCGGCTG
CGCGACGAGG CGGGGCCGGC CTATGCCACC GTCCGCGCGA TCGGCCTGTC CGGGCACATG
CATTCGGTCG CCCTGCTGGA CGCCGGGCTG CGCCCCGTCC GTCCCGCCCT GCTGTGGAAC
GACACGCGCG GCCAGGCGCA GGCGCAACGC CTGCTTCAGG ACGTGCCGGA CATCAGCCGG
GCCACGGGCG TGCGTCCCAT GGCCAGCTTC AGCGCGGCGA AGCTGCTGTG GATCAGGGAG
AACGATCCGG CGGCATTCGC GGCGACGCGG CACGTGCTGT GGGCCAAGGA TTATGTCCGC
CTGTGGCTGA CCGGCGCGCT GGCCACGGAT ATGTCGGACG CCGCCGGGTC GCAATTGTTC
GACCAGCAAA ACCGCACCTG GTTCGCCCCG GTCCGCGACT ATCTGGGGCT CGGCCCCGCT
ATCCTGCCCG AACTGCGGGA CGGCACCGAC TGCGCCGGAC GCCTGCGCAC GGCGACGGCC
CGGGATCTGG GCCTGCCCCC CGGCATAGCC GTCGCCACGG GCGGCGGGGA CACGCCGGTG
GGGGCGGTCG GGCTGGGCCG GGTCGATGCG GGGCAGTCCT ATATCTCGCT GGGGACGGGC
GCGGTCTACG TCACCGTTCA GGACACGTAC GCGCCGGACG AGGCGGTGCG CCTGCACACG
TTCGCCCATT GCGTTCCCCG CCGCTGGTAC CAGATGGCCG CGATGCTGAA CGGCGCGAGC
TGCCTGGCCT GGGTGGCGGC GCTGTGCCGC GAGAGCGATC TCCCCGCCCT GCTGCGGCGG
GTGGAGGCGC GTGGACCGGG CCCCAGCCGC ATCCTGTTCC AGCCCTATCT TCGCGGGGAA
CGCACGCCCC ACGACGATGC CCTGGCCCGG GGCGCCTTCA TCGGCCTCGA CGCATCGTGC
GATGCGGTGG ACCTGGCCCG GGCGGTGCTG GAAGGGGTGG CGTTCTCGCT GCGCCAGGGC
CAGGACCTTC TGGCGTGCCA GCAGGCGATT TCCGGCCCTG TCCCACTGAT CGGCGGCGGT
GCCCGCAGTC CGGAATGGGC CCGCATCATG GCGACGGTCC TGGGCCGCGA CCTGGTCATT
CCGCGCAATG CCGAACATGC CTGCGCCCTG GGCGCGGCCC GGCTGGGCAT GGTGGCGGAT
GGATGGACGA TGGCGGACGC CATGCCGGCT TTCGAGATCG CGCAGGCGAT TGCGCCCGAC
CACGAAGCGA TCCCGCTCTA TGACGCGCAA TATGCGCAAT TCGAACGGCT GTATCCGGCC
ATTCGATCCA TCGGCCAGGG CACGGCCGCC GGCCTGTAA
 
Protein sequence
MTYLGLDIGT TATKAILVDD RQSVLAAATV ASRIDQPAPG LSEQDPDTWI AGVRLALARL 
RDEAGPAYAT VRAIGLSGHM HSVALLDAGL RPVRPALLWN DTRGQAQAQR LLQDVPDISR
ATGVRPMASF SAAKLLWIRE NDPAAFAATR HVLWAKDYVR LWLTGALATD MSDAAGSQLF
DQQNRTWFAP VRDYLGLGPA ILPELRDGTD CAGRLRTATA RDLGLPPGIA VATGGGDTPV
GAVGLGRVDA GQSYISLGTG AVYVTVQDTY APDEAVRLHT FAHCVPRRWY QMAAMLNGAS
CLAWVAALCR ESDLPALLRR VEARGPGPSR ILFQPYLRGE RTPHDDALAR GAFIGLDASC
DAVDLARAVL EGVAFSLRQG QDLLACQQAI SGPVPLIGGG ARSPEWARIM ATVLGRDLVI
PRNAEHACAL GAARLGMVAD GWTMADAMPA FEIAQAIAPD HEAIPLYDAQ YAQFERLYPA
IRSIGQGTAA GL