| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0820 |
|---|
| Symbol | |
|---|
| ID | 6974217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 933249 |
|---|
| End bp | 933725 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643390349 |
|---|
| Product | putative GAF sensor protein |
|---|
| Protein accession | YP_002275225 |
|---|
| Protein GI | 209542996 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1956] GAF domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.180323 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC TGCCTGCCGA TCACCGCGTC ACGCTGGAGG ATTTGCTGTC CACCGTCGAA
TCCGTTCTGA CGGGCGAACG CGACCTGATC GCCAACATGG CGAACATCTC CGCCCTGCTG
TTCGAGGCGC TGCCGGACAT CAACTGGGCC GGGTTCTATA TCCTGCGTGA CGGCGAACTG
GTGCTGGGGC CGTTCCAGGG GCGGGTCGCC TGCACCCGCA TCGCAGTGGG CCGGGGCGTC
TGCGGCACCG CCGCGGCCCG GCGAAGCACC ATCGTGGTGC CCGACGTGCA TGCCTTTCCC
GGCCATATCG CCTGCGACAC CGCGTCCGAA TCCGAAATCG TCGTTCCGAT CCTGGACGGT
GACCGCCTGA TCGGGGTGCT GGATATCGAC AGCCCGATCA GGGACCGTTT CACACCGCAG
GATCGGCTGG TCCTGGAACA GGTGGCGGCG CTGCTTGTTC CCGCACCGAC CGCCTGA
|
|---|
| Protein sequence | MTTLPADHRV TLEDLLSTVE SVLTGERDLI ANMANISALL FEALPDINWA GFYILRDGEL
VLGPFQGRVA CTRIAVGRGV CGTAAARRST IVVPDVHAFP GHIACDTASE SEIVVPILDG
DRLIGVLDID SPIRDRFTPQ DRLVLEQVAA LLVPAPTA
|
|---|
| |