| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0803 |
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| Symbol | |
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| ID | 6974200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 914634 |
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| End bp | 916718 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643390332 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002275208 |
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| Protein GI | 209542979 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.268345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACGA TCTTCGGCTG CATCATCGCT GAACACAGCC TGTCCCTGGT GATCGCCGCC
GGGCTGCTCT GCGGCCTGGG GTCCTGGGTG ACGGCGCGGC TGTTCTTCCG CACGCTCGAT
ACGACCGGGC TGCAGAAATA TGGCTGGCAC TTCCTGACGG CCCTGACCGC GGCGGTGTCG
ATCTGGTGTA CCCACTTCAT CGCCATGCTT GGATTTCATC CTGGCGTTCC CGTGGGGTTC
GATCCGGTCC TGACCATCGT ATCCCTGCTG ATCGCGGTCA TCGGCAGCAC GGCCGGCTTC
GTCCTGGCCG GAAACCGCGG GACGGGGCTG GCGCCCGCAT TGGGCGGTGG GATCGTCGGC
CTGTCGATTG CCGCCATGCA CTATACCGGG ATGACGGCCT ATCGCGTGCA GGGCGTCATG
TCGTGGGACA GGCGTCTTCT CGTCGTATCC ATCGTGCTTG CCGTCGGCCT GTCGGCGGTG
GCACTGCAGG TCGCCGCGCG GCGGGGCCGG CAGGCCCGCA ACCTGATGGC CGGCCTGCTG
GTGCTGGCGA CCATCGGGCT GCATTTCACC GGCATGGCCG CGCTGCGCAT CACGCCCGCG
CCCATCGACG GGTCGTTCGC CAATCCCGAG GCATTGCATG CCCTGGCATT GGCGATCACC
GCTACGGCGC TGGTCATCGT CGGCGCCGGG CTGGCGAGTT ACCTGATCGA CGACAGCGTC
CGGGCCGAAA CCGTGGAGCG ACTGCATCAT ATAGCGATGA ACGACACGCT GACCGGCCTT
CCGAACCGCG CCAGCTTCAA CGACCGTCTC GATTCCGAGA TCGCGTTGGC ACGGGAGAAT
AAGGGCACGT TCGCCTTTAT CGGCATCGAT CTCAATCGCT TCAAGGAAAT CAACGATCTG
CGCGGTCATG CGGCGGGGGA CGAGGTGCTG CGTATCCTCG GCCGGCGCCT CAAGGGATTG
CTGCGCGACG GCGAGTTCGT CGCCCGGACC GGCGGTGACG AGTTCGCGGC CCTGTATCGC
ATGGGGGACA GGCGGGACCT TTCCGACTTT CTCGGACGCC TGGAACGCGC CCTGTTCAAG
CCCCTGCGGC TCGATGGATT CGAGGTCCAG TCAGGCGGCA GCCTGGGCGT GGCCATCTGG
CCCGACGACA CCGCCGACAA GGAACTGCTG GCGAACAACG CCGACCTGGC CATGTATCGC
GCCAAGGCCG ATCCGATCCG GAAGATCTGC TTCTACAAGC CCGAGATGGA CGAGGCCCTT
CGCGCCCGTC GCATCCTCGC CGCCGACCTG CGCGACGCGC TGGCGCGCGA CCAGCTCTCG
CTGCACTACC AGGTCCAGAC GTCGATCGCG ACCGGCCGGA TTCGCGGCTA CGAGGCCCTG
CTGCGCTGGG AGCATCCGCA GATCGGTTCG ATCTCGCCGG CCGAGTTCAT CCCCCTTGCG
GAAGAAAACG GCCTGATCCT TCCGATCGGC GAATGGGTCC TGCGAACCGC CTGCCGGGAA
GCCGCGTCGT GGGAGCCGCC CTACAAGATC GCGGTGAATC TCTCGGCGGT GCAGTTCGTG
CATGCCGATC TGGCGAAGCT GGTCCGGACC GTGCTGGCCG AAACGGGGCT GTCGCCCGAA
CGGCTGGAAC TGGAACTGAC CGAAACGACG ATCTTCGCGG ACCGGAAGCG TGCGTTGCAC
GTGCTGCGCG AAATCAAGGC GCTGGGGGTC ACCATCGCGC TCGACGATTT CGGAACGGGG
TATTCCTCGC TCGATACCCT TCGTGCCTTT CCCTTCGACC GGATCAAGAT CGACCGTTCG
TTCTGCTGCG CGGCGGCGGC CAATCCGCAG ACGCTGGCCA TCATCCGGGC CGTGCTCGGC
CTCGGCAAAT CCTTCGGCAT TCCCGTGCTC GCCGAGGGAA TCGAGACGTA TGACCAGCTT
TCCATGCTGA ACAGCGAAGG GTGCGACGAG GCCCAGGGCT TCCTGCTTGG CCGGCCGGCC
CCGCTCGGGC AGATCGTCGG AAGCGGGCAT ATCACGCTGA CCCGCGAAAG CCGAACCCTC
CGCGACGGGA ACGGGGCGTC CGCCCGTGCC GAATTCGCCC GCTGA
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| Protein sequence | MRTIFGCIIA EHSLSLVIAA GLLCGLGSWV TARLFFRTLD TTGLQKYGWH FLTALTAAVS
IWCTHFIAML GFHPGVPVGF DPVLTIVSLL IAVIGSTAGF VLAGNRGTGL APALGGGIVG
LSIAAMHYTG MTAYRVQGVM SWDRRLLVVS IVLAVGLSAV ALQVAARRGR QARNLMAGLL
VLATIGLHFT GMAALRITPA PIDGSFANPE ALHALALAIT ATALVIVGAG LASYLIDDSV
RAETVERLHH IAMNDTLTGL PNRASFNDRL DSEIALAREN KGTFAFIGID LNRFKEINDL
RGHAAGDEVL RILGRRLKGL LRDGEFVART GGDEFAALYR MGDRRDLSDF LGRLERALFK
PLRLDGFEVQ SGGSLGVAIW PDDTADKELL ANNADLAMYR AKADPIRKIC FYKPEMDEAL
RARRILAADL RDALARDQLS LHYQVQTSIA TGRIRGYEAL LRWEHPQIGS ISPAEFIPLA
EENGLILPIG EWVLRTACRE AASWEPPYKI AVNLSAVQFV HADLAKLVRT VLAETGLSPE
RLELELTETT IFADRKRALH VLREIKALGV TIALDDFGTG YSSLDTLRAF PFDRIKIDRS
FCCAAAANPQ TLAIIRAVLG LGKSFGIPVL AEGIETYDQL SMLNSEGCDE AQGFLLGRPA
PLGQIVGSGH ITLTRESRTL RDGNGASARA EFAR
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