Gene Gdia_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0788 
Symbol 
ID6974185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp899117 
End bp901366 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content71% 
IMG OID643390317 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_002275193 
Protein GI209542964 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTA GAACCGACAC CTGGCCCCGG CCGGTGCCTG CCATGAGCGA TGCCGACATG 
AACCATGCTC CCTTCCACGA CGTCAGCATG GGCGACCCCC TGCCGACGAT GATTCCACCG
CGCGACGGCC GGGCCATTCT TCTGCATGGC ATGCGGCTGA TCCGTCGCTA TCGCACGCTG
TTCCTTGCCG TGGGCGCGGG GACGTTCCTG GCGGGCAGCG GCGCGACGCT GATGCTGAAA
CGCACCTACA TGGCCACCGC GACCGTCGTC GTGTCGCCCG CCAGCACCGA CCCGGTCAAC
CAGAACGCCC AGCCGAACGA CCGGCTGGAC GATGACGAAC TGGCGACGCA GGCCGGCATG
CTGCAGTCGC GCGACGTGGC CGAGGCCGTG CTGCGCGCCC TGCCGCCGCC GCCCGCGCCG
CCGGGCTTCA GCCTGCGCGC GGCCCTGTGT ACCCACGCCC ACCTGCTGTG CGCGCCGGCG
AAACCCATCA GCCCCGAGGA CGCACGGCAG GCGCAGGTGG ACCAGCTTCT GGCCGCCGTC
ACGGTGGTGC CGGGCGTCCA TTCGCGCATC ATCAACATCA GCGTCAACGC CGCCGACGGA
CAGCGCGCGG CCGACCTGGC CAATATGTTC GTGACCGCAT ACCAGCAGAT CGCCCTGGAC
CGGCAGCGCG CCGACCTGAA CCGCACGGCG GGTTGGGTCG ACGGGCGGAC GGGGCAGTTG
CGCCAGCGCT GGCTGGAGGC CGCGACCAAG GCCAGCACGT TCAACGCCGC GCACAAATTG
TCCAATACCG GCGACGGATC GGGCAACGGC CCGCTGATCG ACCGGCAGAT GTCGGAAACC
GCCATCGGCC TGACGCAGGC GCAGAACCGC CTGGCCGCCG CCGAGGCCCG GGCCGACGCC
CTGGCCCGCG CCAGCGCGCG GGGCGAAAGC CGCGCCCTGG TCGCGCTGAC CCAGCAGCCG
ATCCTGGTGG CCACCGCCAA TACGCTGGCG CAACTGGAAA GCACCCGGAC CCAGAAGGCC
GCCGCCATGG GGCCGCATCA CCCCGACCTG GCGGGCCTGG ACCAGCAGAT CGCGGCAACC
CGCGCCAGCC TGGCCACCGA GACCCAGGCC GCCCTGGCCT CGATCAACGA GGACGTGGTG
TCCGCGCGGG CCGAGGTCGC GCAACTGAGC CGCAATCTGG ACCAGTTGCG CCAGGAAGCC
AGCATCCAGG GCTCGCCGCA GGCCGAATAC CGCATGCTGG ACCAGGAGGC GCAGAGCGCG
CGCGACGTGT ACGAGGCCTT CCTGGGCCGG TCGAAGGAAA TGGTCGACCG GGTGGCGCTG
CTGCAGGCGC CGGTCGCCTT CGTCTCGCAC GCCACGGCCC CGGACGCGCC CACCTTCCCC
AATCGCAAGA AGCTGCTGAT GGGCGTGATC GTCCTGTCGG TGGTGGCGGC GGCGGGCTCG
GTGTTCCTGC GCGACCTGCT CTCGCCCGGT TTCGGGGAAA TCGAACAGTT GCGCGCCGCG
ATCGGCCTGC CGCTGCTGAC CGCCATTCCC CGCATTCCGG CGCGCAACGG GCGCGCGGTC
CGCAGCCACG TGCTCGATGC CCCCTTCTCG CCGGCCAGCG AGGCGGTACG CAGCCTTCTG
GCGCAATTGT CACTGTCCGC CCCCCTGACC GGGCGGGGGC GGGTCATCAC CGTCGCCTCG
GCTTCGGGCG GCGACGGCAA GAGTTCGCTG GCCTACTGGC TGGCGGTGCT GGCCCGCACC
GGCGGCCAGC CCGTCCTGGT CATCGACGGC GACCATCGCG AGGGAACCCG CCGCGGCGGC
ACGCCCGTCC CCCATGGGCT GACCGAACTG CTGTCCGGCG CGGCGTCGGT CACGGACGTG
GTGCGTCACG ACGCGGAAAC CGGCGTCGAT TTCATCTCGG CCGGCGCGCC CTGCATGCTT
TCGTTCGACA CGGCGGAAAT CGCGCGCCTG CGCACCCTGC TGAAGGATAT CAGCCGGTCG
TACAACCTGA TCATCATCGA CAGCCCGCCA CTGCAGAACA TGCCCGACGG GCTGGTCTAC
GGCGCCGTCG CGGACCAGAC CGTCTTCGTC TGCCGCTGGC TGCGGACCTC GCGCAGCGCT
GTCCTGTCGT CGATCGAGCG GCTGCGGTCC TACGGGGCGC AGGTTTCGGG CGTCGTGGTG
TCGATGGCCG AGGCCTCGGC CTCGGCGTTC CCCGGCGCGC ATTATCGCGG CGAAACGACG
CGACGCATCG CCCTGAATTA CGATTCCTGA
 
Protein sequence
MTARTDTWPR PVPAMSDADM NHAPFHDVSM GDPLPTMIPP RDGRAILLHG MRLIRRYRTL 
FLAVGAGTFL AGSGATLMLK RTYMATATVV VSPASTDPVN QNAQPNDRLD DDELATQAGM
LQSRDVAEAV LRALPPPPAP PGFSLRAALC THAHLLCAPA KPISPEDARQ AQVDQLLAAV
TVVPGVHSRI INISVNAADG QRAADLANMF VTAYQQIALD RQRADLNRTA GWVDGRTGQL
RQRWLEAATK ASTFNAAHKL SNTGDGSGNG PLIDRQMSET AIGLTQAQNR LAAAEARADA
LARASARGES RALVALTQQP ILVATANTLA QLESTRTQKA AAMGPHHPDL AGLDQQIAAT
RASLATETQA ALASINEDVV SARAEVAQLS RNLDQLRQEA SIQGSPQAEY RMLDQEAQSA
RDVYEAFLGR SKEMVDRVAL LQAPVAFVSH ATAPDAPTFP NRKKLLMGVI VLSVVAAAGS
VFLRDLLSPG FGEIEQLRAA IGLPLLTAIP RIPARNGRAV RSHVLDAPFS PASEAVRSLL
AQLSLSAPLT GRGRVITVAS ASGGDGKSSL AYWLAVLART GGQPVLVIDG DHREGTRRGG
TPVPHGLTEL LSGAASVTDV VRHDAETGVD FISAGAPCML SFDTAEIARL RTLLKDISRS
YNLIIIDSPP LQNMPDGLVY GAVADQTVFV CRWLRTSRSA VLSSIERLRS YGAQVSGVVV
SMAEASASAF PGAHYRGETT RRIALNYDS