Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0734 |
Symbol | |
ID | 6974131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 834745 |
End bp | 835323 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643390263 |
Product | polysaccharide export protein |
Protein accession | YP_002275139 |
Protein GI | 209542910 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0580696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGACGA CCAGTCTCAC CAGCCGTCGT TCCGCCGTGG TGCTTTTCGG CATGGCAACC GTTCTGAGCG GATGCGCCGC CGGATCGTCC CTCGATCCGG TGGCGGCATA CGATCCCAAC CAGTATCGCC TGGGGGTCGA TGACCAGATC CGGGTTCTTA CCTACGGTCA GGACCAGCTG ACGTCCGATT TCCGGGTCGA CAGCAACGGC AAGGTCGCAT TCCCGCTGGC CGGCCACCTG CAGGCGGAAG GACTGACCAC CTCCGAATTC GCGGCGGAAA TTTCCGCCGC GCTGGAGAAG GCGCGCATGG TGCGGCAGCC GAACGTCACG GTCGAAGTGA CGGCCTATCG CCTGGTCTCG ATCCTGGGCG AGGTCGCACG GCCGGGCCAG TATGCGTATC AGCCTTTCAT GACGATGCTG ACGGCCGTCG CATCGGCCGG CGGATTCACC TATCGCGCGC TGGAAGACCG GGCCTACGTC GTCCGGCAGG AAGGCGACCA TACGGTGGTG GGGCGCCTTA ATCCACAGGA CTACGTCAAG CCCGGGGACG TCCTGAAGAT TTATGAACGC CACTTCTGA
|
Protein sequence | MPTTSLTSRR SAVVLFGMAT VLSGCAAGSS LDPVAAYDPN QYRLGVDDQI RVLTYGQDQL TSDFRVDSNG KVAFPLAGHL QAEGLTTSEF AAEISAALEK ARMVRQPNVT VEVTAYRLVS ILGEVARPGQ YAYQPFMTML TAVASAGGFT YRALEDRAYV VRQEGDHTVV GRLNPQDYVK PGDVLKIYER HF
|
| |