Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0510 |
Symbol | |
ID | 6973906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 562442 |
End bp | 563587 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643390042 |
Product | hypothetical protein |
Protein accession | YP_002274919 |
Protein GI | 209542690 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0476754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTTG GATTGCTGTC CCTTTTGTGC CTGTCGCTGA TGATCGCCCC GGCGGCACAG GCACAGACCG TGCTTTCGGC CAATGATGCC CATTCCATCC TGCGAAACGG CGTGCAGGTC CTGCCGAAAC CGTTGAAGCC CGATACGCTG TCCGTCCTGG ACCGGGGGGC GGACGGGCTG TGGACCGTGC GCGCCAGCGT TGCCGTGCCC GTCAGCGTCG TGGGGCCGCC CACCGCTCTG GTCCTGACGC CGGATGGCCG GACCGCGCTG GTGTCTTCCG CCAGCAAGGC GGACCCGGCC CGGGACAGGA TCGTCCCGGA TGACCGGATC AGCGTCATCG ACCTGTCCGG CGACAGGCCG CGCGTGGTCC AGCAGGTCAC GTCCGCCCCC GGCGCCACCA CGCTGCGCAT CACGCCGGAC CAGAAGCATG TGCTGGTCGC CAATGGCGCC GGCGGCGTGG TGACATGGTT CCGCTTCGAC GGGCGCCGGC TGAGCGACCG CACGGTGATC ACCCTGCCGG GGGCCGCCGG ATTCCCGGGT GGGCTGGCGA TCACCCCGGA CGGACGGCGC GCGCTGGTCA GCCTGTGGAA GGGCGACCGG GTCTTCGTCC TGCATCTGGA CGGGGATCGG GTCACGGTCG ATCCGCATCC GCTGGAGATC GGGCCGGGAC CGTGGAATAT CCGCCTGACC GGGGACGGGC ATTACGCGGT CATGGGCATC CTGGGCCATG GCGAGGGATT GCCCGGCGCG CTGTCGGTCC TGGACCTGAC GGCCGCGCCG ATCCGCGAAA TCCAGCGCGT CGTGGTTCCC AACGCGCCCG AGGGGCTGGA CATTTCCAGC GACGGGCGGT TCGTCGCCGT CGTGTCGCAG AACGGGTCGG CCGTCGTTCC GACCTCGCCG CACTATCATG ATCGCGGGAT CGTCACCGTG TTTTCACTGT CCGGCGGCCA TCTGACGCAA CTGGCGCAGG CGCCGGGCAC GCTCTGGCCA CAGGGGCTGG TCTTCGCGCC GGACGGGACG TCGATCCTGG TCCAGGGCGT CATGGACCGC ATGCTGCGCA CCCTGTCCTG GGACGGCACC ACCCTGGCGG TGAAGGGGGA CACGCCCCTG CCCGGCGGGG GCGCCGACAT CGAACGCCAG CGCTGA
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Protein sequence | MRFGLLSLLC LSLMIAPAAQ AQTVLSANDA HSILRNGVQV LPKPLKPDTL SVLDRGADGL WTVRASVAVP VSVVGPPTAL VLTPDGRTAL VSSASKADPA RDRIVPDDRI SVIDLSGDRP RVVQQVTSAP GATTLRITPD QKHVLVANGA GGVVTWFRFD GRRLSDRTVI TLPGAAGFPG GLAITPDGRR ALVSLWKGDR VFVLHLDGDR VTVDPHPLEI GPGPWNIRLT GDGHYAVMGI LGHGEGLPGA LSVLDLTAAP IREIQRVVVP NAPEGLDISS DGRFVAVVSQ NGSAVVPTSP HYHDRGIVTV FSLSGGHLTQ LAQAPGTLWP QGLVFAPDGT SILVQGVMDR MLRTLSWDGT TLAVKGDTPL PGGGADIERQ R
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