| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0493 |
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| Symbol | |
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| ID | 6973889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 542153 |
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| End bp | 544285 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643390027 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002274904 |
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| Protein GI | 209542675 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.405196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.000791154 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACATT CCGCTTCGTC ATCCCTTTTG ATGCGGGATC TTTCCACGCC AGGCCCTACC
GTTGGCCCGT CGGACAAGGG CGAACGGATC TTCGAACTGT TCCGGGACGA CCCGGAATTG
ATGCTGGTCG CCGTCGTCGA TGAAGGCGGC GCGCCGATCG GGCTGGTGGA ACGGCAGGCC
TTTTTCGCCA AGGTTTCGGG GCAGTTCGGG CACGCGCTGT TCGCCGGGCG CCCCGTGGCC
CTGCTTATGG ACGACAGGCC CGTGATCGTG GATGCCGCGG TCTCGTCGAC GGATTTCACG
TCCATGACGA TCACGGCGCA GTCGTCGGAC GTGCTGCGCG GCTACATCGT CGTTGCCGGG
GGGCGGTATC TGGGCACGGG AACGGCCCTG GACCTGATCA ATGCCTCGCA TTCCAATGCG
GTCGCGTCCG CCGCGAACCT GCATGAAACG GCCGAGGAAT TGCGCAAGGC GAACAGGAAG
ATCCTGCGCG ACAAGCTGTT CATGGATACG ATCGTCGAAA ATATCCCCTC GGCCCTCGTG
GTCAGGTCGG TGCGCGACGA CCGGCTGGTC CTGATCAACC GCGCGGCCGA ACTGATGACC
GGCCGCGAGC GGAGCGAACT GGTCGAGCAC ACCGCCGCCG ACGCCTTCAC CGAAACCGAG
ATCGGCCACG CCCTGGTGCA TCCCGAGGGC ACGCGGCGGG AGGGCGTTTC CGAGAGCCTG
CTGCGCAACC GCGCGGGGGA CATGCGCGCG GTCGCGACGC GCTACGTCAC GATCGCGGAC
GAACGCGGCG ACGCGCGCTG GGAACTGTGC GTGGCCGATG ACGTCACCGA ACGGCGGCAG
GCCCGCCAGC AGGTCGAACG GCTGGCGCAT TACGACCCGC TGACCGGACT GGCCAACCGC
GCCCTGTTCG GTGCGCGGCT CGACGGCGTG TGCGTGGCGG GGCACGAGGC CATCCTATTG
TGCATCGACC TGGATTATTT CAAGACGGTC AACGACCTCT ACGGTCACGC GGCGGGCGAT
GCCCTGCTTC GCCTGGTGGC CGACCGCTTG CGGGCCTGCA GCCGTCCCGA CGACCTGATC
GCGCGCCTGG GCGGCGACGA ATTCGCCATC ATCTGGCCCA ACGTGCCGGA AAAGGAGGAA
CTCGCCCATC GCGCGGGTGA AATCGTCGAG ACGATCAGCC GGCCCTACGT CATCGACGGC
CAGCACGTCG CGATCGGCGC CAGCATCGGA TCGGCATCCT ATCCGGCGGA TGCGGGTTCA
TCCGATCTGC TGCGGCAACA TGCCGATATC GCGCTGTACA AGGCCAAGGC GCTGGGGCGG
AACTGCTTTC ATTCGTTCGA TGCCGGCCTC AGCTACGAAA TGCGCAACAA GGCCCGGCTG
GGCGACGAGC TGCGCGCGGC CATCGGAAGC AGCCAGATCT GCCTGCATTT CCAGCCGCTT
TACACCATGC CCGACAACCA GATCGCCGCC TGCGAGGCCC TGGTGCGCTG GAACCACCCC
GTACGCGGGA TGATCCCGCC GGATCAGTTC ATCGGCCTGG CCGAGGAAAA CGGCCTGATC
CACGAACTGG GCGAGTGGGT CCTGCGTGCC GCGTGCCGCG AGGCCGTCTG CTGGCCGCCG
CACGTCAAGG TCGCCGTCAA TGTTTCGCCG GTCCAGTTCC GCAATTCCCG GTTCATGGCC
ATCGTGCAGT CGGCCCTGAT GGAAGCGGGC CTCGTGCCCC ACCGGCTGGA AGTCGAGATC
ACGGAAAATA TCTTCGTGCA GAACAGCGCG GTCAACCGCG ACATCCTGCG ACAGCTCGCC
GACATGGGAT GCAGCGTCGT CCTGGACGAT TTCGGAACCG GCTATTCCGC CCTCAGCTAC
CTGCGGCTGT TCTCGTTCCA GAAAATCAAG ATCGATCGTT CCTTCGTCAA GGAATTGCCG
GAAAAGAGCG CATCGGGCAT CATCCAGGCC ATTGTCAGCC TGGCCCAGAG CATGGACATT
CCCACCACCG CCGAGGGCGT GGAAACCCAG GAACAGTGGG CGAGGCTGCA CGCCATGGGA
TGCAGCGAGG CGCAGGGTTT CCTGCTGGGG CGGCCCGAAC CGGTCGCCGC CATCCGCGAG
CGCCTCGGCG TCAGGGACGT CGTCATGTCC TGA
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| Protein sequence | MKHSASSSLL MRDLSTPGPT VGPSDKGERI FELFRDDPEL MLVAVVDEGG APIGLVERQA
FFAKVSGQFG HALFAGRPVA LLMDDRPVIV DAAVSSTDFT SMTITAQSSD VLRGYIVVAG
GRYLGTGTAL DLINASHSNA VASAANLHET AEELRKANRK ILRDKLFMDT IVENIPSALV
VRSVRDDRLV LINRAAELMT GRERSELVEH TAADAFTETE IGHALVHPEG TRREGVSESL
LRNRAGDMRA VATRYVTIAD ERGDARWELC VADDVTERRQ ARQQVERLAH YDPLTGLANR
ALFGARLDGV CVAGHEAILL CIDLDYFKTV NDLYGHAAGD ALLRLVADRL RACSRPDDLI
ARLGGDEFAI IWPNVPEKEE LAHRAGEIVE TISRPYVIDG QHVAIGASIG SASYPADAGS
SDLLRQHADI ALYKAKALGR NCFHSFDAGL SYEMRNKARL GDELRAAIGS SQICLHFQPL
YTMPDNQIAA CEALVRWNHP VRGMIPPDQF IGLAEENGLI HELGEWVLRA ACREAVCWPP
HVKVAVNVSP VQFRNSRFMA IVQSALMEAG LVPHRLEVEI TENIFVQNSA VNRDILRQLA
DMGCSVVLDD FGTGYSALSY LRLFSFQKIK IDRSFVKELP EKSASGIIQA IVSLAQSMDI
PTTAEGVETQ EQWARLHAMG CSEAQGFLLG RPEPVAAIRE RLGVRDVVMS
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