Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0492 |
Symbol | |
ID | 6973888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 541099 |
End bp | 542076 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643390026 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_002274903 |
Protein GI | 209542674 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.00113875 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGTTG TGACCCTGAC CGTCAGCGAG GACGAGGCCG ATATCCGCCT GGATCGCTGG TTCCGCCGCC ACTACCCCCA CCTGACCCAG GGGGCGTTGC AGAAACTGTG CCGTACCGGG CAGGTGCGCG TGGACGGCAA GCGCGCCGAA ACCTCCACCC GCCTGCTGCC GGGCCAGGCG GTGCGCGTGC CGCCCATTCC CGGCGCGTCG CGCCCCGCGC CGCCGCCCCG CCCGGTGCTG GACGAGCGGC TGGTGCGCGA AATCCGCGGC ATGGTGATCT ATAGCGACGA CCAGGTGATC GTGCTGAACA AGCCCGCCGG TCTGCCGGTG CAGGGCGGTC CCGGGATCAT CCATCACGTC GATGCCATGC TGGACGGGCT GAAGGACCAG GACGACGACC CGCGTCCGCG CCTGGTACAC CGGATCGACC GCGACACGTC CGGGCTGCTG CTGCTGGCGC GCACCCCCGG CGTGGCGGCG AAGCTGGCGG CATCCTTCCG CGGGCGGGAC GTGCGCAAGA CCTACTGGGC GATCGTGGTC GGGCGGCCCA GCCCGGCCTC GGGCGTGATC GACCAGCCGC TGGCCCGGCT GGGCGCCGGC CCCGGCGCGC TGACGGTGGT CGCCTCGCGC AAGGACGCCG ACGCCGCGCA TGCCCTGTCG GAATACGAGG TCCTGGATGC CGCCGGGCGC AAGCTGTCCT GGCTGGCGCT GTCGCCGCTG ACCGGGCGCA CGCATCAGCT TCGCGTGCAT TGCGAGGCCC TGGGCACGCC GATCCTGGGC GATCCGAAAT ATGGCGGGGA TACCGCCCAC CCCGAGGGCT TCGTCGACCG GCTGCACCTG CACGCCCGCA CCCTGGACCT GCCGCATCCG GCGGGCGGGC GGCTGGTGGT ATCGGCCGAC CTGCCGTCCC ACATGCGTGA AACCTTCCGG CAACTGGGCT TCAGTGCCGG GGCCACCCAG CCGCCACGAC GGGGCTGA
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Protein sequence | MSVVTLTVSE DEADIRLDRW FRRHYPHLTQ GALQKLCRTG QVRVDGKRAE TSTRLLPGQA VRVPPIPGAS RPAPPPRPVL DERLVREIRG MVIYSDDQVI VLNKPAGLPV QGGPGIIHHV DAMLDGLKDQ DDDPRPRLVH RIDRDTSGLL LLARTPGVAA KLAASFRGRD VRKTYWAIVV GRPSPASGVI DQPLARLGAG PGALTVVASR KDADAAHALS EYEVLDAAGR KLSWLALSPL TGRTHQLRVH CEALGTPILG DPKYGGDTAH PEGFVDRLHL HARTLDLPHP AGGRLVVSAD LPSHMRETFR QLGFSAGATQ PPRRG
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