| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0487 |
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| Symbol | |
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| ID | 6973883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 534937 |
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| End bp | 535998 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643390021 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_002274898 |
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| Protein GI | 209542669 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00663331 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTCCG AAATGTTGCG TCCCGTCGAT CTGGGTGGGG GGGTGGTCCT GCGCACCCCG
GTCATCCTCG CCCCGATGTC CGGGGTGACG GACCTGCCGT TCCGCCGGCT GGCGCGGCGG
CTGGGCGCGG GCCTGGTCAT TTCGGAAATG ATCGCCTCGT GGGCCATGGT GCGGGAGAAC
CAGGCCACCC TGCGCATGGC CGAGGTCGCC GATGATGACG GCCCGAACGC GGTGCAGCTG
GCCGGCTGCG AGCCCGAGGC CATGGCCCAG GCGGCGCGGA TCGCGGTCGA TCGCGGCGCG
GACATGGTCG ACATCAATTT CGGCTGCCCG GTCAAGAAGG TGGCGGTCGG CCAGCAGGCG
GGCTCGGCGC TGATGCGGGA CGAGGCCCTG GCCGCGCGGC TGCTGGATGC CGTTGTGCGG
GCCGTGGACG TGCCGGTGAC GCTGAAGATG CGCATGGGCT GGGACCATGC CAGCCTGAAC
GCGCCGGCCC TGGCCCGCAT CGCGGAACAG ACGGGCATCC GCATGGTCAC CGTGCATGGC
CGCACGCGCC AGCAATTCTA TAACGGCACC GCCGACTGGT CCTTCGTCCG GCAGGTAAAG
GACGCGGTAT CGCTGCCGGT GATCGTCAAC GGCGATATCC AGACGGTCGA CGACGCGCGG
CAGGCCCTGG CGCTGTCGGG GGCGGACGGG GTGATGATCG GGCGCGGCTG CTATGGCCGG
CCGTGGTTCC TGGCCCAGGT CGCGCAGGCG CTGACGACCG GCGACATCGT GCCCGACCCC
GACCTGGCGA CGGAAAAGGC GATCGTGCTG GATCATTACG ACATGATGCT GTCGCATTTC
GGCGCCCATC CCGGGCTGCG CCTGGCGCGC AAGCATGTCG CCTGGTATTC CGCCGGCCTG
CCGGATTCGG CCGGATTCCG CGCCGCCATC AACCGGGTGG ACCAGGCCCA GGAGGCCATC
GGGATGATCT CCGCCTTCTA TGACCGGCAC ATCGCTGCCG GTTCCCACCG CGCGCGGCGC
GGCACGGCGG CGGGCGGTCA GGATGCCGCC CAGGCGGCTT GA
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| Protein sequence | MSSEMLRPVD LGGGVVLRTP VILAPMSGVT DLPFRRLARR LGAGLVISEM IASWAMVREN
QATLRMAEVA DDDGPNAVQL AGCEPEAMAQ AARIAVDRGA DMVDINFGCP VKKVAVGQQA
GSALMRDEAL AARLLDAVVR AVDVPVTLKM RMGWDHASLN APALARIAEQ TGIRMVTVHG
RTRQQFYNGT ADWSFVRQVK DAVSLPVIVN GDIQTVDDAR QALALSGADG VMIGRGCYGR
PWFLAQVAQA LTTGDIVPDP DLATEKAIVL DHYDMMLSHF GAHPGLRLAR KHVAWYSAGL
PDSAGFRAAI NRVDQAQEAI GMISAFYDRH IAAGSHRARR GTAAGGQDAA QAA
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