| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0483 |
|---|
| Symbol | |
|---|
| ID | 6973879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 528647 |
|---|
| End bp | 530038 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643390017 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002274894 |
|---|
| Protein GI | 209542665 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.457372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.00163645 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCATG AAATCCTGAT CGTCGATGAT GAGCCGGACA TCCGGCTGCT TGTCGAGGGC
ATTCTTCGGG ACGAAGGCTA CGAGACCCGC CTGGCAGGGG ATTCGGATTC GGCAATCAGC
GCCTTTCGGG CCCGCCGGCC GTCTTTGGTC ATCCTGGATG TCTGGCTCCA GGGCTCGCGT
CTCGACGGCC TGGGAATCCT CCAGGCCATC CAGGGCGAGG AACCGGTCGT TCCCACCATC
ATGATCTCCG GCCACGGCAC GATCGAAACC GCGGTCGCGG CGCTGCAGCA CGGCGCCTAT
GACTTCATCG AAAAGCCCTT CCAGTCCGAC CGGCTGCTGC TGGTGGTCCG CCGCGCGCTG
GAGGCATCGC GCCTGGCCCG GGAAAACGCC GAGCTGCGCC TGCGCGCGGG GCCCGAGGCG
ATGCTGTACG GCGACAGCCC GGTCATCGCG GGCGTGCGCA ACCAGATCGA GCGCGTGGCC
CCCAGCGGCT CGCGCGTGCT GATTTCCGGC GCCGCCGGGG CGGGCAAGGA GGTCGCGGCG
CGGATGATCC ACGCGCGCTC GCGCCGGGCC GAAGGGCCGT TCATCGCCCT GAACTGCGCC
ACCCTGGCCC CCGGCCGGTT CGAGGAGGAA CTGTTCGGCA TCGAGGGGGC GCCGGACGGC
ACCGGCCGCC GGACCGGCGT GCTGGAACGC GCCCATGGCG GCACCCTGCT GCTGGACGAG
GTTTCGGACA TGCCGATCGA AACCCAGGGC AAGATCGTCC GCGCGTTGCA GGACCAGAGC
TTCGAGCGCG TGGGCGGGGC GTCGCGGGTC AAGGTCGATG TCCGCGTGCT GGCCGCGACC
AATCGCGACC TGCAGGAAGC GATCGCCGCC GGCCGCTTCC GCGAGGACCT GTATTACCGC
CTGGCGGTGG TGCCGCTGCG CGTGCCCAGC CTGCGCGAAC GGCGCGAGGA CATTCCCGGC
CTGGCGCGGC TGTTCCTGCG CCGGGCGGCG GAAAACGCGG GCCTGCCGCT GCGCGACCTG
TCGGGCGACG CCGTCGCCGC GCTGCAAAGC TATGACTGGC CGGGCAACGC GCGGGAACTG
CGCAACCTGA TGGAACGGCT GCTGATCATG ATGCCGGGCA ACGGGTCCGA CCTGATCCGT
GCCGAGATGC TGCCGCCGTC GGTGGGGCAG GGCGCACCTG CATTGCTGAA ATTTGATCCC
GCCGCCGACG TGATGGGCCT GCCGCTGCGC GAGGCACGGG ACCTGTTCGA AACCCAGTAT
CTGCAGGCGC AGCTCCTGCG TTTTGGCGGC AATATCAGCC GTACCGCCGG CTTCGTCGGC
ATGGAACGCA GCGCATTGCA CCGCAAGTTG AAACAGTTGG GCGTCACGTC GGAGGAGCGG
GGCGCAGGAT GA
|
|---|
| Protein sequence | MGHEILIVDD EPDIRLLVEG ILRDEGYETR LAGDSDSAIS AFRARRPSLV ILDVWLQGSR
LDGLGILQAI QGEEPVVPTI MISGHGTIET AVAALQHGAY DFIEKPFQSD RLLLVVRRAL
EASRLARENA ELRLRAGPEA MLYGDSPVIA GVRNQIERVA PSGSRVLISG AAGAGKEVAA
RMIHARSRRA EGPFIALNCA TLAPGRFEEE LFGIEGAPDG TGRRTGVLER AHGGTLLLDE
VSDMPIETQG KIVRALQDQS FERVGGASRV KVDVRVLAAT NRDLQEAIAA GRFREDLYYR
LAVVPLRVPS LRERREDIPG LARLFLRRAA ENAGLPLRDL SGDAVAALQS YDWPGNAREL
RNLMERLLIM MPGNGSDLIR AEMLPPSVGQ GAPALLKFDP AADVMGLPLR EARDLFETQY
LQAQLLRFGG NISRTAGFVG MERSALHRKL KQLGVTSEER GAG
|
|---|
| |