| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0474 |
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| Symbol | |
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| ID | 6973869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 519355 |
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| End bp | 520242 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643390007 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_002274885 |
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| Protein GI | 209542656 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.455996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00148932 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTCTT CCGTTCTCAA TGTTGGTCCT GAATCCAACC TGTCAAGATA CCTTCAGGAC
ATCCGTAAAT TTCCGATGCT GTCGCCCGAG GATGAACAGC GCCTGTCCCG GCGCTGGAAG
GACAAGGGCG ATACCGAGGC CGCGCATGCG CTCGTCACCT CGCACCTGCG CCTGGTCGCC
AAGATCGCCA TGGGCTATCG CGGCTATGGC CTGCCGCTGG GCGAGCTGAT CAGCGAAGGC
AATATCGGGA TGATGCAGGC GGTCCGCCGC TTCGACCCGG ATCGCGGCTT CCGCCTGGCG
ACCTATGCGA TGTGGTGGAT TCGGGCCGCC ATCCAGGAAT ATATCCTGCA TAGCTGGTCG
CTGGTGAAGA TGGGCACCAC CGCCGCGCAG AAGAAGCTGT TCTTCAACCT GCGCCGCCTG
AAGGGCCAGA TGCAGGCCAT CGACGACGGC GACCTGAAGC CCGAGCAGGT GAACAAGATC
GCCGAATCGC TGGGTGTGCC CGAGCAGGAC GTCATCAACA TGAACCGCCG CCTGTCGGCG
CCGGATCACA GCCTGAACGC CCCGCTGCGC GCCGACAGCG AAGGCGAATG GCAGGACTGG
CTGGTCGACG AACACGACAA CCAGGAACAG ACCCTGGCGG AAAACGAGGA ATTCAGCGGA
CGCAAGGCAT TGCTGGACAA TGCCATGAAG ACGCTGAACG ACCGTGAGCG CCACATCCTG
ACCGAACGCC GCCTGAAGGA CGACCCGGCC ACGCTGGAAG AATTGTCGCA CACCTACAAC
ATCTCGCGCG AGCGGGTGCG GCAGATCGAG GTCCGGGCGT TCGAGAAGGT GCAGGCGGCG
ATGAAGGCGG AAGTCGAGGC CCATCGCGAA GCCCACGCCG CAAACTGA
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| Protein sequence | MASSVLNVGP ESNLSRYLQD IRKFPMLSPE DEQRLSRRWK DKGDTEAAHA LVTSHLRLVA
KIAMGYRGYG LPLGELISEG NIGMMQAVRR FDPDRGFRLA TYAMWWIRAA IQEYILHSWS
LVKMGTTAAQ KKLFFNLRRL KGQMQAIDDG DLKPEQVNKI AESLGVPEQD VINMNRRLSA
PDHSLNAPLR ADSEGEWQDW LVDEHDNQEQ TLAENEEFSG RKALLDNAMK TLNDRERHIL
TERRLKDDPA TLEELSHTYN ISRERVRQIE VRAFEKVQAA MKAEVEAHRE AHAAN
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