Gene Gdia_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0437 
Symbol 
ID6973831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp481411 
End bp482685 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content71% 
IMG OID643389969 
Productseryl-tRNA synthetase 
Protein accessionYP_002274848 
Protein GI209542619 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0193411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGATC TTCGCGCCCT GCGCGCCGAT CCGGCCGCCT TCGACGCCGC CCTGGCCCGC 
CGGGGCGAGG CCCCCGCCGC GATCCATATC GCCAGCCTGG ACGAGGACCG GCGGGCCGCC
GTGACCGCGC TGCAGGACAA GCAGGCCCGG CGCAAGAGCC TGTCGAAGGA AGTCGGCGCC
CTGCGCCGCA CCGGGGAAGA CAGCACGGCG CTGGAAGCCG AGGCCGTGCA ACTGCGCGAG
GACATCGAGA AGCTGGAGGT CCTGGTCCGC GAACTGGATG CCGAAATCCG CGACTGCCTG
GTGGTCCTGC CCAACCGGCT GGATGACGGC GTGCCCGAGG GCGCGGACGA ATCCGCGAAC
GTCGTCGTCC ACCAGGTCGG CGAGCGGCGC GACTTCGCCT TCCCCCCGCG CGAGCATTTC
GCGCTGGGCG AGGCGCTGGG CCTGATGGAT TTCGAAACCG CCGGAAAGCT GTCCGGCGCG
CGCTTCGTCG TGCTGCGCGG CGCGCTGGCG CGCATGGAAC GCGCGCTGGG CCAGTTCATG
CTGGACCTGC ATGTCCAGGA ACACGGCTAT ACCGAAACGG CGGTACCGGT CCTGGTGAAC
GAGGCCGCGA TGTTCGGCAC CGACAAGCTG CCCAAGTTCG CCGACCAGTC CTTCCGGACC
GAGGACGGGC GCTGGCTGAT TCCCACGGCC GAGGTCCCGC TGACCGCCAG CGTCGCGGGC
GACATCCTGC CGGCGTCGGC GCTGCCGCGC CGCATGGTCG CGCTGTCCTC GTGCTTCCGC
AGCGAGGCCG GGGCCGCCGG CCGCGACACG CGGGGCATGC TGCGCCAGCA CCAGTTCCAG
AAGGTCGAGA TGGTGTCGAT CACCGCGCCC GGGGACAGCG ACGCCGAGCA TGAGCGCATG
ACCCGCTGCG CCGAGAAGGT GCTGGAACGG CTGGGCATCC CGTATCGCCG CATGCTGCTG
TGCGCGGGCG ACACCGGCTT CGGCGCGGCC AGGACCTTCG ATCTCGAAGC CTGGCTGCCC
GGCCAGGATG CGTGGCGCGA AATTTCGTCC TGCTCCACCA CGCGCGATTT CCAGGCGCGG
CGGATGAATG CGCGCTACCG CCCGGCGGAC GGTGCCGGCC CGGAATTCGT CCATACGCTG
AACGGCTCGG GCCTCGCCGT GGGACGCACG CTGATCGCGG TGATGGAAAA CTACCAGAAC
GCCGATGGCA GCATCACCGT GCCGCAGGCG CTGCGCCCCT ACATGAACGG GCTGGCGGCC
ATCAGCGCCC GCTGA
 
Protein sequence
MHDLRALRAD PAAFDAALAR RGEAPAAIHI ASLDEDRRAA VTALQDKQAR RKSLSKEVGA 
LRRTGEDSTA LEAEAVQLRE DIEKLEVLVR ELDAEIRDCL VVLPNRLDDG VPEGADESAN
VVVHQVGERR DFAFPPREHF ALGEALGLMD FETAGKLSGA RFVVLRGALA RMERALGQFM
LDLHVQEHGY TETAVPVLVN EAAMFGTDKL PKFADQSFRT EDGRWLIPTA EVPLTASVAG
DILPASALPR RMVALSSCFR SEAGAAGRDT RGMLRQHQFQ KVEMVSITAP GDSDAEHERM
TRCAEKVLER LGIPYRRMLL CAGDTGFGAA RTFDLEAWLP GQDAWREISS CSTTRDFQAR
RMNARYRPAD GAGPEFVHTL NGSGLAVGRT LIAVMENYQN ADGSITVPQA LRPYMNGLAA
ISAR