| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0409 |
|---|
| Symbol | |
|---|
| ID | 6973803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 448510 |
|---|
| End bp | 449382 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643389941 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_002274820 |
|---|
| Protein GI | 209542591 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.596587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.0713633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGGAACG TCCTGCGGCA ATGGGCCTGC GCCGGGCTGG TTGCCGTTGC CCTCGCCCAT
CCCGCCGCCG GCCGGACGAT CAAGGTCTCG ACCTGGAATC TCGACTGGCT GACGGCGCGG
GCGGCGGGGG ACCCGACGCT GCCGCCGGAC GTCCATCCCC GCGCCGACGC AGACCTGCGG
CGCCTCGCCG TCTATGCCGC GCGGCTGGAT GCCGACATCG TGGGTTTCCA GGAGGTCGAT
TCCCCTGCCC TCGCCGCCCG GCTGTTTCCC CCCGGGCGCT ACCGCATCGT CATGACCGCC
GACCCGGTGG TGCAGCGGAC CGGTCTTGCG GTCGCAACGT CGCTGACGAT CGAGCGCCAC
CCGGACCTGG CGGCGCTGGA CGTCTATCCG CCCACCGCCC CCCATCCATT GCGATCCGGC
CTGGACGTCA CGATCGGCGA CGGCACAGCC AACCTGCGTG TGCTGGTCGT TCACCTGAAG
GCCGGGTGCC GCGACGCCGC GCCCTCCGAC CGGCGCGCCG CGTGCCTTAC CCTGGCGCGC
CAGATGGCGG TACTGGATGA CTGGGTCGCC CAGCGGCAGG ACGAGGGCGT TCCCTTTCTG
GTCATGGGCG ACTTCAACCG CAACCTGACG CCGGGCGACC CGTTCTTCCA TCTTCTGGAC
CAGGACGGGC CGCTGACCCT GGCGACGGCC GGACGGGCCA GCCCGTGCTG GGGAGGCACC
TATTTCATCG ACCATCTGCT GCTGGGCAAC CAGGCGCGCG GGTGGCTGCG GCCGGACAGC
CTGCGGGTCC TGACCTATGA CGAACAGGAC CCGGCCCGCG CACCGGCGCT GTCCGACCAT
TGTCCGGTCT CGGTCAGGCT GGAAATGCCT TAA
|
|---|
| Protein sequence | MGNVLRQWAC AGLVAVALAH PAAGRTIKVS TWNLDWLTAR AAGDPTLPPD VHPRADADLR
RLAVYAARLD ADIVGFQEVD SPALAARLFP PGRYRIVMTA DPVVQRTGLA VATSLTIERH
PDLAALDVYP PTAPHPLRSG LDVTIGDGTA NLRVLVVHLK AGCRDAAPSD RRAACLTLAR
QMAVLDDWVA QRQDEGVPFL VMGDFNRNLT PGDPFFHLLD QDGPLTLATA GRASPCWGGT
YFIDHLLLGN QARGWLRPDS LRVLTYDEQD PARAPALSDH CPVSVRLEMP
|
|---|
| |