| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0403 |
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| Symbol | |
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| ID | 6973797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 440106 |
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| End bp | 441881 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643389935 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_002274814 |
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| Protein GI | 209542585 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase
[COG0703] Shikimate kinase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.831997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGTC CGATCGAACC GCCAGCCCCC GAGAGTACCG ACCTGTCCCC CGCCGGGGGG
CGCGACGCCC CGTTCCTGGC GTTCGACCTC GATGCCCTGG TTGCCGCCGA CAGGCCCGAC
AGGCCGGGCC CGCGCGCCCC GGGACCGCAC GAGCGCAGCG TCGTGCTGGT CGGGCTGATG
GGGGCGGGCA AGACGACGAT CGGCCGGCGG ATCGCGGCAC GGCTGGGCAT GCCCTTCGTC
GATGCCGACG TGGAAATCGA GCGCGCGGCC GGATGTTCCA TCGCCGACCT GTTCCGCCGG
TATGGCGAGG CCGAATTCCG CAAGGGCGAG CACCGCGTCA TCCGCCGCAT CCTGAGCGGC
CACCCGCTGG TGCTGGCGAC GGGCGGCGGC GCGTTCATGG ACCCGGTGAC CCGCGCGGTC
ATCCGCGACC GCGCGACCTC GGTCTGGCTG CGGTGCCCGC TGCCGGTGCT GGTGCGCCGC
GTCCAGGGGC GGACCCACCG GCCCCTGCTG AACGAGGGCA ACCCGCGCGA CATCCTGGCG
GCCCTGATGG AAATCCGGCA TCCGGTCTAT GCCGAAGCGA ACATCACCGT GGATTGTGGA
GAAGAAAGCG TGGACCAGAG TGCCGCCACC GTCATCAGCG CCCTGACCCT GGCGAAGCCG
CCGCGACTCG TCCCCGTGAT CCTGGAACGC TGGCGCTACG ACGTGACCAT CGGCGAGGAC
CTGCTGCGCC ATGCCGGAAT CCTGCTGGCC CCGGTCCTGC CGCAAAAGCG TGTGGTGGTC
GTGACCGATT CGACCGTCGC GACGCTGCAC CTGCCGCGCC TGCTGGCCGG GCTGGCCGAG
GGCGCGATCC GGGCGGAAAC GATCGTCGTC CCGCCCGGGG AAGGGTCGAA GACAATGGCC
GAATACGAGC GCGTGACCAA CGCGCTGCTG GACATGGGGG TCGAGCGCGG CACCACGGTG
ATCGCCCTGG GCGGCGGCGT GGTGGGCGAC CTGGCGGGAT TTGCCGCCGC CACCACCCTG
CGCGGCCTGC CCTTCGTGCA GATCCCGACG ACGCTGCTGT CGCAGGTCGA TTCGTCGGTG
GGCGGCAAGA CGGGGATCAA CACCCCGTTC GGCAAGAACC TGCTGGGCGC CTTCCATCAG
CCGCTGGCGG TGCTGGTGGA TACCACGACG CTGGCCAGCC TGCCGGCGCG CGAGGTCCGC
GCCGGCTATG CCGAGATCGT CAAATCCGGC CTGATCGGCG ATGCCGCCCT GTTCGAATGG
TGCGAAGCCA ACGGCCAGGC CGTACTGGAC GGTGACGCCG ATATCCGGGC CGAGGCCGTC
CGCCAGGCCT GCGCGTTCAA GGCCCATGTC GTCGGCGACG ACGAGCGGGA AGAAAAGAAA
TCGGACGGCC GCGCACTACT CAACCTGGGC CATACGTTCG GCCACGCGCT GGAGGCCGAA
CTGGGCTATG ACGGCCGCCT GCTGCATGGC GAGGCCGTGT CGATCGGCCT GCGCCTGGCG
TTCCTGGCGT CGGTCCGGAT GGGGTTCTGC GACCGCACCG ACCTGAACCG CGTCACCGCC
CATCTGGAGC GGCTGGGCAT GCCGGCGCGG ATCAGCGACG TTGGCGAAAC GTTCTCGGCC
GACCGGTTGA TCGCGCATAT GCAGCGGGAC AAGAAAATGC GCGACGGACG CCTGTCCTTC
GTCCTGGTGC GCGGGATCGG GCAGGCCTTC ACCTGCCGCG ACGTCCCGGA CGCGGTGGTC
CGCGATATTC TTTTGGCGGA AGGATGCGCG GCCTGA
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| Protein sequence | MSRPIEPPAP ESTDLSPAGG RDAPFLAFDL DALVAADRPD RPGPRAPGPH ERSVVLVGLM
GAGKTTIGRR IAARLGMPFV DADVEIERAA GCSIADLFRR YGEAEFRKGE HRVIRRILSG
HPLVLATGGG AFMDPVTRAV IRDRATSVWL RCPLPVLVRR VQGRTHRPLL NEGNPRDILA
ALMEIRHPVY AEANITVDCG EESVDQSAAT VISALTLAKP PRLVPVILER WRYDVTIGED
LLRHAGILLA PVLPQKRVVV VTDSTVATLH LPRLLAGLAE GAIRAETIVV PPGEGSKTMA
EYERVTNALL DMGVERGTTV IALGGGVVGD LAGFAAATTL RGLPFVQIPT TLLSQVDSSV
GGKTGINTPF GKNLLGAFHQ PLAVLVDTTT LASLPAREVR AGYAEIVKSG LIGDAALFEW
CEANGQAVLD GDADIRAEAV RQACAFKAHV VGDDEREEKK SDGRALLNLG HTFGHALEAE
LGYDGRLLHG EAVSIGLRLA FLASVRMGFC DRTDLNRVTA HLERLGMPAR ISDVGETFSA
DRLIAHMQRD KKMRDGRLSF VLVRGIGQAF TCRDVPDAVV RDILLAEGCA A
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