| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0376 |
|---|
| Symbol | |
|---|
| ID | 6973770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 414346 |
|---|
| End bp | 416577 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643389908 |
|---|
| Product | (p)ppGpp synthetase I, SpoT/RelA |
|---|
| Protein accession | YP_002274787 |
|---|
| Protein GI | 209542558 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.860733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTTCGG ACCCCGATGC CCCGCCCGCG CCGGCACGGG TCATCTCGTG CGAGGGATTG
CTGCGGCGCA TTCGCAGCTA CGACCCGGAT GCCGACCTCG ACCTGATTCG CCGCGCCTTC
GCCGTGGCCC AGGCCGCCCA TGCCGGGCAG GTCCGCGACA ACGGTGACCC GTACATCACC
CATCCGCTGG CGGTTGCCAG TATCCTGGCG GGCTTCCATC TCGACCCGTC GTCGATCGCG
ACGGCGCTGC TGCACGATAC GATCGAGGAT ACCGGCGTCA CGCACGATCG GCTGCGCGCC
GAATTCGGGC CGACCATCGC CGACCTGGTG GATGGCGTCA CCAAGCTGAC CCGGCTGGAA
CTGCAATCCG ACCGGACCAA GCAGGCCGAG AATTTCCGCA AGCTGGTCCT GGCGATGTCC
AAGGACATCC GGGTGCTGAT CGTCAAGCTG GCGGACCGGC TGCACAACAT GCGCACGCTG
CATTACGTGC AGCGGCTGGA CCGCCGCCAG CGTATCGCGC GCGAGACCAT GGAAATCTAT
GCGCCTCTGG CCGGGCGCAT CGGCATGGAC AAGGTCAAGA CCGAACTCCA GAACCTGTCC
TTTGCCGAAC TGGAGCCCGA AGCCAACGCC ACCATCCGTG CGCGCCTGAA CTACCTGCGC
GGCCAGGGCG CCGACGTGAT CGAGGAAGTG CGGCGCGAAC TCGCGCATCT GTGCCGCGAA
GCCGGACTGG GCGAGGTCGA GGTGACGGGG CGCGAGAAAT CGCCCTTCTC GATCTGGGAG
AAGATGCAGA ACCGCAACGT CGCGTTCGAG CAGCTGTCCG ACATCATGGC GTTCCGCATC
CTCGTGCCGA CGCGTGAGGC CTGCTACATC GCGCTGGGCG CCGTCCATGC GGCCTATCCG
GTCATTGTCG GGCGGTTCAA GGATTATATC TCCACCCCCA AGGCGAACGG CTACCAGAGC
CTGCATACCG GCGTGACCCT GCGCCAGCCC CGCAACCAGA AGATCGAAGT GCAGATCCGC
ACCGCCGAGA TGCACGACAT CGCGGAAAAC GGCGTCGCCT CGCACTGGCT GTACAAGCAG
TTGCCGGGGG CCGGCGAGGA TGCGGCGCGC ACGGTCACGG GCCTGCGCTG GGTCCAGGAC
CTGCTGGATA TTCTCGAAGA TTCGGCGGCA CCCGACGAAT TCCTCGAAAA CACCAAGCTG
GAACTCTACC AGGACCAGGT GTTCTGCTTC ACCCCGAAAG GGCAGCTGAT TTCGCTGCCG
CGCGGGGCCA CGCCGGTCGA TTTCGCCTAT GCCGTGCACA GCCAGGTCGG CGACAGCTGC
GTGGGGGCGC GGATCAACGG GCGGCTGATG CCGCTGCGCC ACGAACTGCA GAACGGCGAC
CAGGTCGAAA TCATGACGGC GCGGGGCGGT ACGCCGTCGC CCTCGTGGGA ACGCTTCGTC
GTCACCGGCA AGGCGCGCGC GCGCATCCGC CGCCATGTCG CGGCCCAGCA GCGCGAGGCC
CATGTCGATG GCGGCCGCGC CGCCCTGGCC AAGGCCTTCC GGCAGGAGGG CGTGGACGGG
TCGGAAAAGG TCCTGGACAG CATCCTGCCC GACCTGAAGC TGGTATCGGT CGAGGATCTG
TACGTCGCGG TCGGCAACGG CAATATCAGC CCCCGCGACG TGGTGCATGC GGCCTATCCC
GAGTTGCGGC AGACGCCGCG CGCGCCGCGC ATGGTGCCGG GTATTCCCAT GCGGGCGCCG
TCGCGGGTGG CCAGCCGGCC GAAGCCGGGC GGCGGCATGG CGCTGGCCGG GATCGGCCCG
GGCATCGCGG TGCATTTCGC CGGCTGCTGC CATCCGCTGC CGGGCGACAA GATCGTCGGC
ATCGTCGCGA CCGGCAAGGG CATCACCATC CATATGGCCG GGTGCCAGAC GCTGGAGAGC
TTCGCGGCGA CCCCCGAACG GTTCATGGAC GTGGACTGGG ATTACGACAT CATCGGCCGT
GGCGCGACCG AACCGCATAT CGGGCGGCTG AGCGTGATCG CGGCGAACGA ACCGTCCGTG
CTGGCGACGC TGACCAACAC CGCGTCGAAG CATGACGGCA CCGTCGTCAA CCTGCGCATC
GTGAACCGCC AGCTCGATTT CATGGAAATC CTGGCGGATA TCGAGGTCCG CGACCTGCGT
CACCTCTCCT CGGTGATCGC GGCGCTGCGG GCGGCCAACG GCGTGGTCCA GGTCGAGCGC
GCGAAGGGAT GA
|
|---|
| Protein sequence | MPSDPDAPPA PARVISCEGL LRRIRSYDPD ADLDLIRRAF AVAQAAHAGQ VRDNGDPYIT
HPLAVASILA GFHLDPSSIA TALLHDTIED TGVTHDRLRA EFGPTIADLV DGVTKLTRLE
LQSDRTKQAE NFRKLVLAMS KDIRVLIVKL ADRLHNMRTL HYVQRLDRRQ RIARETMEIY
APLAGRIGMD KVKTELQNLS FAELEPEANA TIRARLNYLR GQGADVIEEV RRELAHLCRE
AGLGEVEVTG REKSPFSIWE KMQNRNVAFE QLSDIMAFRI LVPTREACYI ALGAVHAAYP
VIVGRFKDYI STPKANGYQS LHTGVTLRQP RNQKIEVQIR TAEMHDIAEN GVASHWLYKQ
LPGAGEDAAR TVTGLRWVQD LLDILEDSAA PDEFLENTKL ELYQDQVFCF TPKGQLISLP
RGATPVDFAY AVHSQVGDSC VGARINGRLM PLRHELQNGD QVEIMTARGG TPSPSWERFV
VTGKARARIR RHVAAQQREA HVDGGRAALA KAFRQEGVDG SEKVLDSILP DLKLVSVEDL
YVAVGNGNIS PRDVVHAAYP ELRQTPRAPR MVPGIPMRAP SRVASRPKPG GGMALAGIGP
GIAVHFAGCC HPLPGDKIVG IVATGKGITI HMAGCQTLES FAATPERFMD VDWDYDIIGR
GATEPHIGRL SVIAANEPSV LATLTNTASK HDGTVVNLRI VNRQLDFMEI LADIEVRDLR
HLSSVIAALR AANGVVQVER AKG
|
|---|
| |