Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0351 |
Symbol | dapD |
ID | 6973745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 392806 |
End bp | 393651 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643389883 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_002274762 |
Protein GI | 209542533 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.882129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0887772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACG AGCACGCCCT CCGGACCCAT ATCGAGGCAG CATGGGAGCG GCGCGACACG CTGTCCTCTG CCACGAAAGG CGCGGACCGC GAGGCCGTCG AGCATGCGCT GGCCGGGCTG GATTCGGGCG CGCTGCGCGT TGCCACGCCC ACCGATGCCG GGTGGGTCGT CAATGAGTGG CTGAAGAAGG CGGTGCTGCT GTCCTTCCGC CTGAACGACA GCCACGTGAT GCCTGCCGCA CCGGCGCCGT TCTTCGACAA GGTGCCGCTG AAGTTCCAGG GTTGGGACGA GGCACAGTTC GGCCAGGCGG CCTTCCGCGC CGTTCCGGGC GCCATCGTCC GGCGGTCGGC CTATATCGCG CCCGGCGTGG TGCTGATGCC CAGCTTCGTC AATGCCGGCG CCCGCGTCGA AAGCGGCACG ATGGTCGATA CCTGGGTCAC GATCGGAAGC TGCGCGCAGA TCGGCCGCAA CTGCCATATC AGCGGCGGTG TCGGCATCGG TGGCGTGCTG GAACCGTTGC AGGCCGCGCC GGTCATCATC GAGGATGACT GCTTCATCGG CGCGCGCTCG GAAGTCGCCG AGGGCGTGAT CGTCGAGCGC GGTAGCGTGC TGTCGATGGG CGTGTTCCTG AGCGCGTCGA CCAAGATCGT CGACCGCACG ACGGGCGAGG TCTTCGTCGG CCGCGTGCCG GCCTATTCGG TCGTGGTGCC GGGCACGCTG CCGCCGCGTA CGCCGCATGC CGCCGACGGC ACGCCGCTGC CCGCGCTGGC CTGCGCCGTG ATCGTGAAGC GCGTCGACGA ACGCACCCGC TCCAAGACCT CGATCAACGA ATTGCTGCGC GATTGA
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Protein sequence | MNDEHALRTH IEAAWERRDT LSSATKGADR EAVEHALAGL DSGALRVATP TDAGWVVNEW LKKAVLLSFR LNDSHVMPAA PAPFFDKVPL KFQGWDEAQF GQAAFRAVPG AIVRRSAYIA PGVVLMPSFV NAGARVESGT MVDTWVTIGS CAQIGRNCHI SGGVGIGGVL EPLQAAPVII EDDCFIGARS EVAEGVIVER GSVLSMGVFL SASTKIVDRT TGEVFVGRVP AYSVVVPGTL PPRTPHAADG TPLPALACAV IVKRVDERTR SKTSINELLR D
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