| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0350 |
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| Symbol | |
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| ID | 6973744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 391652 |
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| End bp | 392809 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643389882 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002274761 |
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| Protein GI | 209542532 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.306111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0744523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGGTG CCCTGACCCC GGCATCCACC CCCGCGCTCA CCCTGGCGCG GGACCTGATC
CGCGCGCCGT CGGTCACGCC GGACGATGGC GGCGCGATCG GGGTGCTGAC GGCTGCCCTG
CGCGGGCTGG GGTTCGACGT CACCGACCTG CCGTTTGGCG AGGGACCTGC CCGCACCCCG
AACCTGTTCG CGCGGCTGGG CCGGTCGGGG CCGCATCTCT GTTTCGCCGG ACATACCGAC
GTGGTGCCGC CCGGCGATGG CGGCTGGACC TCGGGCCCGT TCGAGGCCGC GCTGCGGGAC
GGCCGCCTGT ACGGGCGCGG CGCATGTGAC ATGAAGGGCG GGATCGCCGC CTTCGTCGGC
GCCGTGGCAC GGATACTGGA ATCGGGCCGG ACGCTGCGGG GTTCGGTCAG CCTGCTGATT
ACCGGCGACG AGGAAGGACC GGCCACCTTC GGCACCGTCA AGGTGCTGGA ATGGATGGCG
GCGCACGGGC AGGTTCCCGA TTTCTGCGTG GTGGGCGAAC CGACCAATCC CGACCATCTG
GGCGATGTCA TCAAGATCGG GCGTCGCGGC AGCCTGAATG CCCGGATCGT CGTGCCGGGA
ATCCAGGGTC ACGTGGCCTA TCCCCATCGG GCCGACAATC CGGTCCATCG CCTGCTGGCC
ATCCTGTCGG ACCTGACGGC CCGCCCGTTG GACCAGGGAA CGGAGTGGTT CGAACCGTCC
AGCCTGCAGG TCACCACGGT CGATGTCGGC AACGAGGCGA CCAATGTCAT TCCCGGCCGG
GCCACGGCAC GGCTGAACAT CCGCTTCAAC GACCTGCATA CCGGCCAGGG CCTGGCCGAC
TGGATCCGCG GCGTCGCGCA TGTCCACGCC CCGGGGGCGG AGGTCACGGT CCAGATCAGC
GGTGAAGCCT TCCGTACCGA ACCCACGCCG GAGCTGGACA TGCTGGCCGC GTCCATCCAG
GCGGTGACGG GGCGGGCGCC GCGGCTGGAT ACCGGGGGCG GCACGTCCGA TGCACGGTTC
ATCAGCCGCT ATTGCCCGGT TGCCGAATTC GGCCTGGTCG GGGCCAGCAT GCACAAGGTG
GACGAGCACG TGCCCGTTGC CGACCTTCTC GCGCTGACCG ACATCTATGC GGCGTTTCTT
GAAAGGCTGA TGGGATGA
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| Protein sequence | MTGALTPAST PALTLARDLI RAPSVTPDDG GAIGVLTAAL RGLGFDVTDL PFGEGPARTP
NLFARLGRSG PHLCFAGHTD VVPPGDGGWT SGPFEAALRD GRLYGRGACD MKGGIAAFVG
AVARILESGR TLRGSVSLLI TGDEEGPATF GTVKVLEWMA AHGQVPDFCV VGEPTNPDHL
GDVIKIGRRG SLNARIVVPG IQGHVAYPHR ADNPVHRLLA ILSDLTARPL DQGTEWFEPS
SLQVTTVDVG NEATNVIPGR ATARLNIRFN DLHTGQGLAD WIRGVAHVHA PGAEVTVQIS
GEAFRTEPTP ELDMLAASIQ AVTGRAPRLD TGGGTSDARF ISRYCPVAEF GLVGASMHKV
DEHVPVADLL ALTDIYAAFL ERLMG
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