| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0348 |
|---|
| Symbol | truA |
|---|
| ID | 6973742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 390234 |
|---|
| End bp | 391010 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643389880 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_002274759 |
|---|
| Protein GI | 209542530 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0489458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0429336 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCGC CGTCGCTCCA GCGCTGGGCC GTACGCATCG AATATGACGG ACGCCCCTTC
GTCGGCTGGC AGCGCCAGAT CACCGGCCTG TCGGTCCAGC AGGTACTGGA GGAAGCAGCG
AGCCGGCTGG CGTCCGGACG CGTCGTGCCC AGCATTACCG CCGGGCGCAC CGATGCCGGC
GTGCATGCCA CCGGCCAGGC GGCGCACCTG GATTTTCCCG GCGACGTGCG CCTGAACGAT
TCGACCGTGC GCGATGCGCT GAATTTCCAC ATGAAGCCTT ATCCGGTGGC GGTGCTGCGG
GCCTGTCCGG TCGATACCGA ATGGAGCGCG CGGTTTTCCG CCATCCGCCG GTCCTATCGC
TATCGGATCC TGAACCGCCG CAGCCGGCCG ACCCTGGATG ACGGACGGGT CTGGCTGGTC
AAGCGCACCC TGGACGAAGC GGCCATGGCG CGGGCCGCCC GCCTTCTGCT GGGACGGCAT
GATTTCACTT CGTTCCGCGC CAGCGCATGC CAGGCCAGGA GCCCGCTGCG GACGCTGGAC
CGGCTGGGCG TCGTCCGCCA GGGCGAGGAA ATCGTGATCG AGGCCGAGGC CCGGTCGTTC
CTGCATCACC AGGTGCGCAA CATGGTCGGC ACATTGAAGC TGGTGGGGGA AGGACTGTGG
GCGCCCGACC GGGTGGCGGC GGCACTGGCC GCCTGCGACC GGCGGGCGGC GGGCCCGACA
GCCCCCCCGG ACGGGTTGTA CCTGACGGGG GTGGGCTACG ACCCCGATCC GTTCTAA
|
|---|
| Protein sequence | MTAPSLQRWA VRIEYDGRPF VGWQRQITGL SVQQVLEEAA SRLASGRVVP SITAGRTDAG
VHATGQAAHL DFPGDVRLND STVRDALNFH MKPYPVAVLR ACPVDTEWSA RFSAIRRSYR
YRILNRRSRP TLDDGRVWLV KRTLDEAAMA RAARLLLGRH DFTSFRASAC QARSPLRTLD
RLGVVRQGEE IVIEAEARSF LHHQVRNMVG TLKLVGEGLW APDRVAAALA ACDRRAAGPT
APPDGLYLTG VGYDPDPF
|
|---|
| |