| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0299 |
|---|
| Symbol | |
|---|
| ID | 6973691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 328534 |
|---|
| End bp | 331155 |
|---|
| Gene Length | 2622 bp |
|---|
| Protein Length | 873 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643389830 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_002274711 |
|---|
| Protein GI | 209542482 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.391446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.153174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCC CTTCACCGGA CGGCGCCACT CCGGCCATGG CGCAATGGTT TTCCCTCAAG
GCCGAACATC CCGAGGCCCT GCTGTTCTTC CGCATGGGTG ATTTCTACGA GATGTTCTTC
TCCGACGCCG AGGCGGCGGC CGGCGCGCTG GATATCGCCC TGACCGCGCG CGGCACGCAT
GGCGATATCC CGATTCCGAT GTGCGGCGTC CCGGTCGGGG CGGCATCGTC CTACCTGGCG
CGGCTGATCC GTCGCGGGTT CCGCGTGGCG GTGGCCGAAC AGACCGAACC GCCGCGCAAG
CCCGGCAAGG GCGGCCCCAA GGGCCCGCTG GCCCGCGCCG TGGTGCGGCT TGTCACCCCC
GGCACCCTGA CCGAGGACGA ATTGCTGGAG GCCGGACGGC AGAACCTGCT GCTGGCCGTC
GCCTCGCGCG GCGGACGCGG AACGCGCGGC TGGGGCGTGG CGTGGATCGA TATTTCCACC
GGCACATTCG AGACGGCCTC GGTTCCCGCC GAGGGGCTGA TGGACCTGCT GGGCCGGCTG
GACCCGGCGG AAATCCTGGC GGCGGCCGAG ATCGACCTGG GTGACTTCGC GGCCCGGCGC
GCGCCGGCAA CCATTCCCCC CGGCCCGGAA GCCGCCCGGC GGCGCGTGGC CGAGACCTTC
CATGTCGCCA GCCTGGACGC GTTCGGGACC TTTTCCGACG AGGAAGCGGT CGCCGGCGCC
ATGGCCCTGG ATTACGTCCG GCGCAGCCAG GCCGGCCAGA TGCCGCGCCT GTCGAGGCCC
CAGGCGCATG AAAATGGCGG AGTGCTGGGC CTGGACCCCG CCACGCGCGC CAGCCTTGAC
CTGCTGCGCA CGCGCGACGG CGGCACCGAG CATACGTTGC TGGCCAGCGT CGGCCGCACC
GTCACCGCGC CCGGCAGCCG ATTGCTGGCG GAATGGATCG CCGCCCCCCT GACCCGGGAC
GCCGCGATCG CCGCCCGCCA GGACGGCTGG TCGTGGCTGA TCGAGGAAGG CGGCGTGCGC
GCGGCCCTGC GGCAGGGATT GCGCGGTACG CCGGACATCG CCCGCGCGCT GGCCCGCCTG
TCGCTGGGCC GTGGCCTGCC GCGCGACGCG GCGGCGATCC GCGACGGGCT GGCCATCGCC
CGGCGCATCG CCCAGGCCCT GACGGACGGC CGCACCGCAC CGCCCGCGCT GCTGGCCGAC
GCCATGCGCC ACCTGGGCGA GGCAACGGAC CTGGAAGCCC GGCTGAAGCA GGCCCTGGCC
GAAGACCTGC CGGCCCGGGT GGAAGACGGC GGCGTGATCG CCGCCGGCTT CGATGCCGAA
CTGGACGCCG AACGGGCCCT GCGCGACGAC AGCCGCCGGG TCATTGCCGG GTTGCAGAAC
GATTATGCCC AGAAATTCGG GCTGGCCAGC CTGAAGATCC GCCATCACGC GCAACTGGGC
TACGTCATCG AGGTCCCGGC GGCGACCGCC CCCCGCCTGC GCGAGCGCAC CGACCTGATC
CTGCGCCAGG GCACGGCCAG CGCGGCCCGG TTCTCGACCG AGGAACTGGT CAGCCTGGAC
CGCCGCATCG CCGAGGCCGC GGAGCGTGCC GCAACGCGCG AGCGGCGGAT CTTCGCCGCC
CTGGTGCGCG AGATCCTGGA CGAACCCGCC CCGCCGGTCA TCGCGGGGGC GCTGGCGGTC
CTGGACGTGC TGCAATCCTG CGCCGACCTG GCCGCCGGCG GCATGTGGTG CCGGCCCGAG
GTCACGGACG ACGACGCCTT CACGCTGACG GCCTGCCGCC ACCCGGTGGT CGAGGCGGCG
CTGCCGCGCA GCGAGCGCTT CACCCCGAAC GATTGCGTGC TGGAACCCGC CCAGCGCGTC
ATGCTGCTGA CCGGGCCGAA CATGGCGGGC AAATCGACCT TCCTGCGCCA GACCGCGCTG
GCGGTCATCC TGGCGCAGGC CGGGCTGCCC GTCCCGGCCA AGGCCGCGCG GATCGGCGTC
GTCGACCGGC TGTTTTCCCG CGTGGGGGCA TCGGACGACC TGGCGCGCGG GCGGTCGACC
TTCATGGTGG AAATGACCGA GACCGCCGCC ATCCTGAACC AGGCCGGCCC CCGGTCCCTG
GTGGTGGTCG ATGAAATCGG GCGCGGCACC GCGACGCTGG ACGGGCTGGC CATCGCCTGG
TCGGTGCTGG AAGCCATGCA TTCGACATTG CGCTGCCGTT CCATTTTCGC AACGCATTTC
CACGAACTGG CCGAACTGGC GGAAAGCCTG CCGCGCCTGT CGCCCCACAC GATGAGCGTG
CGGGAATGGA AGGGCCAGGT GATCTTCCAG CACGAGGTCA TACCCGGATC GGCGCGCCGA
AGCTGGGGCG TGCACGTGGC CCGGCTGGCC GGCGTGCCGG AACCGGTTGT CCGCCGCGCC
GCGCGGCTGC TGGCGGGACT GGAGAAGGAA CGCGCGGTGG GCGCCAGGCC CCTGCCGCTG
TTCGCCCCGG CGGATAGCAC CCCGCCTGCC GAAGAACCCG ATCCGGGCGT GCCCGAACCG
GTGCGGCGGA TGCTGGAACA GCTCGACCCC GACGAGCTGA CGCCGCGCAC GGCGCTGGAC
ATGGTCTACG CGATCAAGAA ACTGATGCTT GAAGAATCCT GA
|
|---|
| Protein sequence | MTLPSPDGAT PAMAQWFSLK AEHPEALLFF RMGDFYEMFF SDAEAAAGAL DIALTARGTH
GDIPIPMCGV PVGAASSYLA RLIRRGFRVA VAEQTEPPRK PGKGGPKGPL ARAVVRLVTP
GTLTEDELLE AGRQNLLLAV ASRGGRGTRG WGVAWIDIST GTFETASVPA EGLMDLLGRL
DPAEILAAAE IDLGDFAARR APATIPPGPE AARRRVAETF HVASLDAFGT FSDEEAVAGA
MALDYVRRSQ AGQMPRLSRP QAHENGGVLG LDPATRASLD LLRTRDGGTE HTLLASVGRT
VTAPGSRLLA EWIAAPLTRD AAIAARQDGW SWLIEEGGVR AALRQGLRGT PDIARALARL
SLGRGLPRDA AAIRDGLAIA RRIAQALTDG RTAPPALLAD AMRHLGEATD LEARLKQALA
EDLPARVEDG GVIAAGFDAE LDAERALRDD SRRVIAGLQN DYAQKFGLAS LKIRHHAQLG
YVIEVPAATA PRLRERTDLI LRQGTASAAR FSTEELVSLD RRIAEAAERA ATRERRIFAA
LVREILDEPA PPVIAGALAV LDVLQSCADL AAGGMWCRPE VTDDDAFTLT ACRHPVVEAA
LPRSERFTPN DCVLEPAQRV MLLTGPNMAG KSTFLRQTAL AVILAQAGLP VPAKAARIGV
VDRLFSRVGA SDDLARGRST FMVEMTETAA ILNQAGPRSL VVVDEIGRGT ATLDGLAIAW
SVLEAMHSTL RCRSIFATHF HELAELAESL PRLSPHTMSV REWKGQVIFQ HEVIPGSARR
SWGVHVARLA GVPEPVVRRA ARLLAGLEKE RAVGARPLPL FAPADSTPPA EEPDPGVPEP
VRRMLEQLDP DELTPRTALD MVYAIKKLML EES
|
|---|
| |