Gene Gdia_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0287 
Symbol 
ID6973679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp316715 
End bp317932 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content71% 
IMG OID643389818 
ProductMltA domain protein 
Protein accessionYP_002274699 
Protein GI209542470 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.797874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTCATT CCTTCGTGAC CAAGATCCTG CGGGGCGCCT CCGCCGGCGC CATTCTCCTG 
CTATCCGCCT GTGCCGCGAC CGATCTGGAG GGGACGGGGC AGCCGCTCGC GTTTTCCGAC
ATCAAGGGCT GGGGAAGCGA TGAGGCGGTC CGCGCCCTGC CGGTCTTCCT GGGGGAATGC
CGCTATCTGG GCCGCCTGCC GGCCGATGCC GGCCTGGGCG CCGATAGCGG GCGCGGCACG
CATGTCGGCG ACTGGCTGCC GGCGTGCCGC GCTGCTGCCG CGCTGCCGAC CGGGGACGCC
CCGGCGGCCC GGCAGTTCTT CGAGACATGG TTCCAGCCGG TGCTGACCGC CGGTCAGGCC
CTGTTCACCG GCTATTACGA ACCGGAAATC CGCGGTTCGC TGTCGCGTGG CGGCGTGTAC
CAGACCCCGG TCTATGGCGT GCCAGACGAC CTGGTCCGCA CCCGCGCCAC CGATGGGCGC
ATGGTCACGG GCCGCTGGCA GGGCAGCCAG TTCATGCCGT ACTGGACGCG GGCGCAGATC
GATGCCGGCG CGCTGGCAGG CCGCAACCTG GAACTGCTCT GGGTCGCGGA CCCTGCCGAC
CTGTTCTTCC TCCAGATCCA GGGATCGGGT CGTGTCCGCC TGCCCAGCGG ACAGGTGGTA
CGCCTGGGCT TCGGCGCCAA GAACGGCCAG GAATACGTAC CGCTGGGCCG CGTCCTGGTG
CGGCAGGGCG AAATGGATGC GGACGCCGTC AGCATGCAGT CGATCCGCGC CTGGCTGACC
GCCCATCCCG ACCAGGCCCG CACGGTGATG GAGGACAATC CGAATTACGT GTTCTTCACC
GTGCTGGACC ATGTCTATGC CGACCAGGGG GCACCCGGGG CGCTGGGTGT GCCGCTGACG
CCGGGCCGGT CGGTGGCGGT CGACAGGCGG TCGATCCCGC TGGCCTCGCC CGTCTGGGTG
GAAACGACGC TGCCCGGCCC CGCGGGGTCA AGCTGGCAGC GGCTGGTTTT CGCCCAGGAT
ACCGGGACGG ATATCCAGGG GCCGGCGCGG GCCGACCTGT TCATGGGCTG GGGCCCCGAC
GCCGAACAGA CCGCCGGCGC GATGCAGCAG CGGGGCCGGA CGATTACGTT CGTGCCGCGC
CCCGTCGTGG TCATGGAGCC CGCTTCGATG GGCGCCGCCC CCACGGCGAA GATCGTCGGG
ATCGCGGGCG AACCATGA
 
Protein sequence
MSHSFVTKIL RGASAGAILL LSACAATDLE GTGQPLAFSD IKGWGSDEAV RALPVFLGEC 
RYLGRLPADA GLGADSGRGT HVGDWLPACR AAAALPTGDA PAARQFFETW FQPVLTAGQA
LFTGYYEPEI RGSLSRGGVY QTPVYGVPDD LVRTRATDGR MVTGRWQGSQ FMPYWTRAQI
DAGALAGRNL ELLWVADPAD LFFLQIQGSG RVRLPSGQVV RLGFGAKNGQ EYVPLGRVLV
RQGEMDADAV SMQSIRAWLT AHPDQARTVM EDNPNYVFFT VLDHVYADQG APGALGVPLT
PGRSVAVDRR SIPLASPVWV ETTLPGPAGS SWQRLVFAQD TGTDIQGPAR ADLFMGWGPD
AEQTAGAMQQ RGRTITFVPR PVVVMEPASM GAAPTAKIVG IAGEP