| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0248 |
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| Symbol | |
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| ID | 6973640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 272471 |
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| End bp | 274465 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643389779 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_002274660 |
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| Protein GI | 209542431 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.250562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGGA CAATGGCCTC GCAACGCCCT GATCCCCCTC TGCCGGCCGA CAGGCGGCGC
CCGGTCAACC GCATCGCCGT CAATGTCCTG CTGGACGGCC TTCTCGCCGC CCTGTCGGCG
CCGCTGGCAC GCTGGCTGGC CGACCCGCGC GGCGGCCTGC TGCATCCGCT CTGGTTCGTC
GCGGGCGGCG CCATCACCCT GATCATCAGC GGCCTGCCGT TTCGTGTGCA GCAGCAATAT
TGGCGGTTTT CGGGGGTGGG CGACCTGCTG AACATCGCGG GTGCCTCGGT GGCCAGCGCC
ATCCTGTTCG CGCTGGGCCT GCATGTCACC GGCTTTCCGA TCCCGACCCC GACCTTTCCC
ATCATCCATG CCCTGGTGCT GCTGACGCTG ATGGGCGGGA TACGGATCAT CTACCGGCTA
TCCTATCGCC GCACGGCGCG GCGGCAGGCA TCCAGCCAGG TGATCCTGGT CGGCTCGGAC
AATTCGGCCG ACCTGTTCAT CCGCGCGGTC GAACGCGCGC CCGATCCCGC CTTTCGCGTG
GCCGGCATCG TCACCCAGGG GCGGCGGCAG GCCGGGCGGC GCATCCACGG CATTCCCATC
CTGGGCCATG TCGAGGGAAT GGACGACATC CTGGCCCGCC TGGACGGGCA TGGCGGCCGG
CCCGAGCGGC TGGTCATCAC CGATGCCGCG TTCCGGGGCG AGGACCTGGC CGAGATCATG
CAGGTGGCCG AGCGGCGGGG ACTGACCGTC CTGCGGGCGC CGGTCCTGAC CGACCTGACG
CCCGCCGACC GGCTGGAACT GCGCCCCGTC GCGATCGAGG ACCTGCTGAA CCGTCCCCAG
GTCGGGCTGG ACCATGACGG CATGGCGGCC CTGCTGGGCG GCCGCACCGT CTTGGTGACC
GGGGCCGGCG GCTCGATCGG GTCGGAACTG GCGCGGCAGA TCGCGGAATA CGAGCCCGGC
CGCCTGCTGC TGCTGGACCA TGGCGAATTC GCGCTGTGGC AGATCGACGT GGAACTGTCG
GAACGCGCGC CCCGGCTGCG GCGCGAGACG ATCCTGGCCG ATATCCGCGA CCGGGCGCGG
ATCGAACAGG TCTGCGCGCA GTACCGTCCC GAACTGGTGT TCCACGCGGC GGCACTGAAA
CACGTGCCGA TGGTCGAGGC CAATCCGTGC GAGGGGGTGC TGACGAACGT CATCGGCACC
CGGATCGTCG CGGACGCGGC GGCGCGGCAT GGCGCCCGCG CCCTGGTCAT GGTCTCGACG
GACAAGGCGG TGAATCCGTC CAGCCTGATG GGGGCCTCCA AGCGCGCGGC CGAGATGTAT
TGCCAGGCCC TGGATGTCGA GGCCCGCACC GGCGACGAAT CCGGCGTGAT GCGGTGCGTC
ACCGTACGGT TCGGCAACGT CCTGGGTTCG ACGGGATCGG TGGTGCCCCT GTTCCGCCGG
CAACTGGAAC GGGGCGGGCC GCTGACGGTT ACCCACCCCG ACATGCAGCG CTATTTCATG
ACGGTGTCCG AGGCCGTGGG GCTGGTGCTG CAGGCCAGCG TGCGCGGCAC CATCCGCGCC
CGCGCGGGCA GCGGCACGGA CACGCTGCTG CGCAGCGGCG GCATCTTCGT CCTGGACATG
GGCAAGCCGA TCCGGATCGT CGACCTGGCG CGGCAGATGA TCCGCCTGGC CGGCCTGCGC
CCCGACCAGG ACGTGCCGAT CCGCTTCACC GGCCTGCGTC CGGGGGAAAA GCTGTTCGAG
GAACTGTTCC ATGGGCGCGA GGCCCCGGTC GCGACCGACC ATCCGGGCCT GAAGATGGCG
ACCCCCCGCA TGGTGGACCG TGGGGCCGTC GGCCTGGCGA TCGACACGCT GGAAGCCGCC
TGCCGCGCCG AGGATACTCC GGCCGTCCTT GCGCTGATCG GGAGCCTCGT TCCCGAATTC
GCCCATAACC CGACCGGCGA CGTGCGCGAT AGGCTCGCGG ACCCGACCGA CGCCGAAAGG
ACCATGACCC CATGA
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| Protein sequence | MVGTMASQRP DPPLPADRRR PVNRIAVNVL LDGLLAALSA PLARWLADPR GGLLHPLWFV
AGGAITLIIS GLPFRVQQQY WRFSGVGDLL NIAGASVASA ILFALGLHVT GFPIPTPTFP
IIHALVLLTL MGGIRIIYRL SYRRTARRQA SSQVILVGSD NSADLFIRAV ERAPDPAFRV
AGIVTQGRRQ AGRRIHGIPI LGHVEGMDDI LARLDGHGGR PERLVITDAA FRGEDLAEIM
QVAERRGLTV LRAPVLTDLT PADRLELRPV AIEDLLNRPQ VGLDHDGMAA LLGGRTVLVT
GAGGSIGSEL ARQIAEYEPG RLLLLDHGEF ALWQIDVELS ERAPRLRRET ILADIRDRAR
IEQVCAQYRP ELVFHAAALK HVPMVEANPC EGVLTNVIGT RIVADAAARH GARALVMVST
DKAVNPSSLM GASKRAAEMY CQALDVEART GDESGVMRCV TVRFGNVLGS TGSVVPLFRR
QLERGGPLTV THPDMQRYFM TVSEAVGLVL QASVRGTIRA RAGSGTDTLL RSGGIFVLDM
GKPIRIVDLA RQMIRLAGLR PDQDVPIRFT GLRPGEKLFE ELFHGREAPV ATDHPGLKMA
TPRMVDRGAV GLAIDTLEAA CRAEDTPAVL ALIGSLVPEF AHNPTGDVRD RLADPTDAER
TMTP
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