| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0238 |
|---|
| Symbol | |
|---|
| ID | 6973630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 262017 |
|---|
| End bp | 263894 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643389769 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002274650 |
|---|
| Protein GI | 209542421 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.773221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.692019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTGC TCGTCATTTC CGACCTGACC CTTCGCATCG CGGGACGCAC CCTGCTGGAC
GGCGCGTCGC TGACCGTCGA TCCGGGGCGC AAGATCGGCC TGGTCGGGCG AAACGGGGCC
GGAAAATCCA CCCTGCTGGC CGCGATCGCG GGCGATATCG CACCGGACGG CGGCACCATC
CACCTGTCGT CGCGCGCGCG CATGGCCCGC ATCCGGCAGG AAGCCCCGTC GGGCGACGCC
AACCTGCTGG ACACGGTGCT GGCCGGCGAC GCCGAACGCA CCGCCCTGAT GGCCGAAGCC
GACCAGACCC CCGACCCGGT GCGGCTGGCC GACATCCACG AACGGCTGCG GGCGATCGGG
GCCGACAGCG CGCCCGCGCG CGCCGCGACC ATCCTGTCGG GCCTGGGCTT CGACGCCGAC
GCCCAGGCCC GCCCGGTGTC GGATTTTTCC GGCGGCTGGC GCATGCGCGT GGCGCTGGCC
ACGGCGCTGT TCCTCAACCC CGACCTGCTG CTGCTGGACG AACCGACCAA CCATCTGGAC
CTGGAAGCCA CGATCTGGCT GGAAAACTGG CTGTCCCGCT TTGCCGGGGC GGCGCTGATC
GTCAGTCATG ATCGCGGGTT GCTGGACCGG GCGGTGGATG CCATCGCGCA TCTGGACCAA
CGCAAGCTGA CGCTGACGCC GGGCGGATAC AGCGAATTCG TGCGCATCCG CACCGAACAG
GCCCTGCAGC AGGCCCGGGC GGCGGAACGG ATCGCCGCGC AGCGTGCCCA CATGCAATCC
TTCGTCGACC GCTTCCGCGC CAAGGCGACC AAGGCGCGGC AGGCCCAGGC ACGGCTGAAG
GCGCTGGAGA AGCTGCCGGT CCTGGACACC GTGGTCGAGG ATGCGCCCAC CCGCTTCGCC
TTCCCCGAAC CCGCGCCCCT GCCCCCGCCG ATGCTGACGC TGGACCGGGT TTCGGTCGGC
TATGGCGGCC GGCCGATCCT GTCCGGCCTG ACCCTGCGGC TGGACATGGA GGACCGGATC
GCCCTGCTGG GCGCCAACGG CAACGGCAAA TCGACCTTCG CCAAGCTGAT CGCGGGACGG
CTGGCGCCGA TTTCGGGCAC CGTGGCGCAT GGTCCGCGCC TGCGCGTCGG CTATTTCGCC
CAGCATCAGG CGGAGGAACT GGTTCCCGGC GAAACGCCGG TCGATCACAT GACCCGCGTC
ATGCCCAAGG CACCGCCCAC CGCCGTGCGG GCGCAACTGG CCCGCTTCGG GCTGGATGCC
GACCGCGCCG ACACGGTGAC GCGGGACCTG TCGGGCGGCG AGAAGGCGCG GCTGCTGCTG
GCGCTGGCCA CGCGTGAGGC ACCGCACCTG CTGATCCTGG ACGAACCGAC CAACCATCTG
GACCTGGACG CGCGCGAGGC CCTGATCCGC GCCCTGGCGG AATTCGAGGG GGCCGTACTG
CTGATCAGCC ATGACCCGCA CCTGGTCGAA CTGGTCGCCG ACCGGCTGTG GCTGGTGGGC
GACGGCACCG TGCGGCCCTT CGACGGCGAC ATGGCGGAAT ATCGGACATG GCTGTCCGAA
CGCGCCCGGG CGGCCACCCG CCCGGCCACC CCGGCGGCCC CCCGCCGCGA CGACAGGCGC
GAACGCGCCG AAGCCCGCAA GGCCATCGCC CCCCTCCGCC GGAAGGCACG GGACGCCGAA
GCCCGGATGA GCCGCCTGGC CGACGAGCGC GGCCGGCTGG AAACCCGGCT GGCCGACCCC
GCGCTCTATG CCGCCGGCGG CGCCGACGAG GTCACGGCGA TCAACACGCG GCTGGCCGCC
ATCGGGCGCG AGCAGGAAGA GGCCGAGGAG GAGTGGCTGC TGGCCGAGGC GGCGATCGAG
GAAAGCGCCG CCGAGTGA
|
|---|
| Protein sequence | MSLLVISDLT LRIAGRTLLD GASLTVDPGR KIGLVGRNGA GKSTLLAAIA GDIAPDGGTI
HLSSRARMAR IRQEAPSGDA NLLDTVLAGD AERTALMAEA DQTPDPVRLA DIHERLRAIG
ADSAPARAAT ILSGLGFDAD AQARPVSDFS GGWRMRVALA TALFLNPDLL LLDEPTNHLD
LEATIWLENW LSRFAGAALI VSHDRGLLDR AVDAIAHLDQ RKLTLTPGGY SEFVRIRTEQ
ALQQARAAER IAAQRAHMQS FVDRFRAKAT KARQAQARLK ALEKLPVLDT VVEDAPTRFA
FPEPAPLPPP MLTLDRVSVG YGGRPILSGL TLRLDMEDRI ALLGANGNGK STFAKLIAGR
LAPISGTVAH GPRLRVGYFA QHQAEELVPG ETPVDHMTRV MPKAPPTAVR AQLARFGLDA
DRADTVTRDL SGGEKARLLL ALATREAPHL LILDEPTNHL DLDAREALIR ALAEFEGAVL
LISHDPHLVE LVADRLWLVG DGTVRPFDGD MAEYRTWLSE RARAATRPAT PAAPRRDDRR
ERAEARKAIA PLRRKARDAE ARMSRLADER GRLETRLADP ALYAAGGADE VTAINTRLAA
IGREQEEAEE EWLLAEAAIE ESAAE
|
|---|
| |