Gene Gdia_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0217 
Symbol 
ID6973609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp234757 
End bp236004 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content70% 
IMG OID643389748 
ProductSerine--pyruvate transaminase 
Protein accessionYP_002274629 
Protein GI209542400 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0378021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGGC AGATCGATCC GCCGCAGCGG CTGCTGATGG GGCCGGGGCC GGTGAATGTG 
CATCCGCGCG TGCTGCGCGC GATGACGGCG GACATGCTGG GCCAGTTCGA CCCGGAGATG
ACGGGGTACA TGAACCAGAC GATGGCGCTG TACCGCCAGG TGTTCATGAC CGAAAACCGC
TGGACCTTCC TGGTCGACGG CACGGCGCGG GCGGGGATCG AGGCCGCCCT GGTCTCGCTG
GTCGAGCCGG GGGCGCGGCT GCTGATCCTG CGGGCGGGCC GGTTCGGGCT GCTGCTGTCG
GAAATCGCGC AGCGCATCGG CGCCGAGATC CGCACCATCG ACATCCCGTG GGGCGAGGTC
GCGACCCCGG AGCAGATCGA GGCCGCGATC ATCGAACACC GGCCGCAGGT CTTCGCCACC
ATCCACGGCG ATACCTCGAC CACCATGGCC CAGCCGCTGG ACGGCGTGGG GGCGATCTGC
CGGCGGCACG GCGTGCTGTC CTATGTCGAT GCCACGGCGA CGCTGGGCGG TATGGCGGTG
GCGACCGACG CCTGGGGCGT GGATGTGGTG ACGGGCGGAT TGCAGAAATG CATGGGCGGT
CCGCCGGGCT CGGCCCCCAT CACCATCTCG GACCGGGCGG CGGCGCATAT CATGGCCCGC
CGGCATGTCG AGGCCGGGAT CAGGGGCGCC GATGCCCAGG ATGGCAGCCG GACGCGGATC
GGATCGAACT ATTTCGACCT GGCCATGATC ATGGAATACT GGTCCGAGAA GCGGCTGAAC
CACCACACCG AAGCGACCTC CATGCTCTAT GCGGCGCGCG AGGCGGCGCG GATCATGGTG
GAAGAGGGGC TGGAGGCGCG CTTCGCCCGG CATCGCGCCG CGAGTGAGGC CATGGCCGCC
GGATTGCGGG CGATGGGCCT GACGCTGTAC GGCCAGGATG CGTACCGCAT GGCCAACGTC
ACCGGCGTGT TCATCCCCGA CGGCGTGGAT GGTGAGCGCG CCCGCACCCG CATGCGCGAC
GAATTCGAGA TCGAGATCGG CACCGCCTTC GGCCCGCTGG CGGGCCGGAT CTGGCGCATC
GGCGCCATGG GCTACAACGC CATGAAGCAC AAGGTCCTGA TCACCCTGGG CGCGCTGGAA
GCCGTGCTGG CCGCCGAAGG CCACGCCCTG CCGCGCGGGG CCGGCGTGGA TGCCGCCCGC
GCGTCCTACG AGGCCATGCC CGGGGCCGCA CCCGGGGCCG CGTCATGA
 
Protein sequence
MFGQIDPPQR LLMGPGPVNV HPRVLRAMTA DMLGQFDPEM TGYMNQTMAL YRQVFMTENR 
WTFLVDGTAR AGIEAALVSL VEPGARLLIL RAGRFGLLLS EIAQRIGAEI RTIDIPWGEV
ATPEQIEAAI IEHRPQVFAT IHGDTSTTMA QPLDGVGAIC RRHGVLSYVD ATATLGGMAV
ATDAWGVDVV TGGLQKCMGG PPGSAPITIS DRAAAHIMAR RHVEAGIRGA DAQDGSRTRI
GSNYFDLAMI MEYWSEKRLN HHTEATSMLY AAREAARIMV EEGLEARFAR HRAASEAMAA
GLRAMGLTLY GQDAYRMANV TGVFIPDGVD GERARTRMRD EFEIEIGTAF GPLAGRIWRI
GAMGYNAMKH KVLITLGALE AVLAAEGHAL PRGAGVDAAR ASYEAMPGAA PGAAS