Gene Gdia_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0195 
Symbol 
ID6973587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp210408 
End bp211274 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content64% 
IMG OID643389727 
ProductBeta-lactamase 
Protein accessionYP_002274608 
Protein GI209542379 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.210334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.167544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC GCCATTTTCT ATGGGGCGGT TCGACCTTTC TCGCCTCGCC GTCCCTTGCC 
CGGCCTGCCC CGCCTTCTGT GATCTCGGAC TATGAAAACG GCACCGGGGG GCACATCGGT
CTGTATGCGG AAAATGTGAA GACAGGCGCG AAGCTGACCT GGAGGGCACG GGAACGCTTC
GTCATGTGCA GCACGGTCAA GGCGTCCCTT GCCGCCTGCG TGCTGTCGCG CGTCGATCGC
GGTCGCGACA GGCTGGAGGA CATCATTCCC TACAGCGCCA GCGATATACA GGATTGGTAT
GCCCCCGTGG CAAAGGCGAA CCTGGCCAGG GGCGCGATGT CGGTCGGCGA CATGTGCCAG
GCGGCGGTCG AGCAAAGCGA CAATACCTGC GCCAATATTC TCCTCGCCCG TATCGGCGGT
CCATCGGCGC TGACGGCATT CTGGCGCGGG ATCGGGGACC GGGAAACGCG CCTTGACGAC
CCAGAACCCT ATCTGAATCG CACCCCGCCC GGCGGCGTAC GAAACACGAC TACGCCCGCG
TCCATGGCCA CGATAATGCG GTCTCTTGTT CTCGGGCGGG TTCTGTCCGA CGCATCGCGG
GCCATCTTCA CGCGATGGCT GGTCGGGTGC CGAACCGGTG ACGACCGGTT GCGCGCCGGC
CTTCCGCCCC ATTGGGTCAT CGGTGACAAA ACGGGCAATA ACGGCCGCGA TGCCGCCGGA
GACATCGCAG TGGTCTGGCC CGAACGCGAT GTCCCGATCA TCCTGTGCGT CTACACGCGA
GGCGGATCGC CAACGCAGCA GCAATTCCGC ACGGCCTTCG CTGGCATCGC GCGTGTCGTG
GGGACGCGGC TTTATCCCGG GATTTGA
 
Protein sequence
MKRRHFLWGG STFLASPSLA RPAPPSVISD YENGTGGHIG LYAENVKTGA KLTWRARERF 
VMCSTVKASL AACVLSRVDR GRDRLEDIIP YSASDIQDWY APVAKANLAR GAMSVGDMCQ
AAVEQSDNTC ANILLARIGG PSALTAFWRG IGDRETRLDD PEPYLNRTPP GGVRNTTTPA
SMATIMRSLV LGRVLSDASR AIFTRWLVGC RTGDDRLRAG LPPHWVIGDK TGNNGRDAAG
DIAVVWPERD VPIILCVYTR GGSPTQQQFR TAFAGIARVV GTRLYPGI